Gene Haur_2709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2709 
Symbol 
ID5734590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp3463268 
End bp3463951 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content40% 
IMG OID641279852 
Productmembrane-flanked domain-containing protein 
Protein accessionYP_001545475 
Protein GI159899228 
COG category[S] Function unknown 
COG ID[COG3428] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00542291 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTATG TTGAGCAACT CTTGGCTGAA AACGAAGATA TTAAATATGA AGCCCATCAG 
CACCCGTTCG TTTTCTTGGG ACGCATTAGT TTTGAAGTCG TTGTTATGGC AATTATGGTT 
GCAGCAATTG TGTTTATCAC CAATTTGCCT GGCCAAAAAT GGCAAGAAAT TCAACCATAT 
GTGCAATTTA TTTTAATTGC GATCATTCTG CTCATTCTCG CCAGCGCAGT GATTGACTTC 
CTACGCTGGC GGAACGAAAA GTTTCTGCTT ACCGATCGTC GAGTCATTCA TTTGCGGGGC 
ATTATTAATA AATCGACGCT CGATTCATCG CTCGATAAAA TTAACGATGT CCAAATGCGT 
CAAACCTTTA TGGGGCGGAT GTTCAATTAT GGTGATCTTG AAGTCCAAAC GGCTAACGAA 
AATAGTGATA ATCTTTTTAC CTTTATTCGT AACCCACTGG AATTTAAACG CGCCATGATG 
AATGCCAAAG AGGAACACGA CCGCGAACCA GCAATGTATA TGCAATCGGT CAACGCTTAT 
CAAAACTTTG TACCACCATA TCAACGCCCC AACGATCAAG ACGTTGAAGA ATTGTTATTG 
CGCTTAAACG ATCTACGTCA GAAAAATTTA ATTACTGATG CTGATTTTGA GGCCAAAAAA 
CGCGAAATTT TAAGTCGGAT ATAA
 
Protein sequence
MSYVEQLLAE NEDIKYEAHQ HPFVFLGRIS FEVVVMAIMV AAIVFITNLP GQKWQEIQPY 
VQFILIAIIL LILASAVIDF LRWRNEKFLL TDRRVIHLRG IINKSTLDSS LDKINDVQMR 
QTFMGRMFNY GDLEVQTANE NSDNLFTFIR NPLEFKRAMM NAKEEHDREP AMYMQSVNAY 
QNFVPPYQRP NDQDVEELLL RLNDLRQKNL ITDADFEAKK REILSRI