| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2553 |
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| Symbol | |
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| ID | 5734431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 3280917 |
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| End bp | 3281606 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641279693 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001545319 |
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| Protein GI | 159899072 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCCAC TAGGCGACGA TAACTCCAAA CTACGGCGAC GCGGCTATGT AACCTATGGC
CTGATTGCCC TCAACGTGCT GGTATTCTTA TACGAATTTT CGTTGGGCAG CGAAAGCCAA
GCCTTGCAAG ATTTTATTAT GACCTGGGGC GCAGTGCCCG AACGGATCGC TGCTGGCGAT
GGCCTGATCA CCTTATTGAC TTCGATGTTT TTGCATGGTG GTTGGGCACA CTTAATTGGT
AATATGCTGT TTCTGTTTGT TTTTGGTGAT AATGTTGAAG ATGCCTTTGG CCATGGCAAA
TACTTAGCTT TTTATCTAAT TACTGGATTA ATTGCCACGG CGGCACACAT TCTGCTTAAT
CTCAATTCAG CCAGCGCTGG AATTCCCAGC GTCGGTGCAT CAGGGGCAAT TTCGGGCGTG
CTCGGAGCCT ATATCGTAAT GTTTCGCAGC AATTCGGTCA AAGTATTGCT CGGACGTTTC
GTTCAAACGG TTCCAGCTTG GATGATGATT GGTTTATGGG CAGTACAGCA ATTTGTTGCA
ACCTTTGCCA CAATTACCAC AACCAGCCAA ACCAGCGGCG GTGTCGCCTA TGCTGCTCAC
GCTGGCGGGT TTATCGCTGG GGTTGTACTT GGCTTTGTAC TAAGCCGCAT CCAACCAGCT
CCGCAATTAG CCCAGCGCCG TAAAGCCTAA
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| Protein sequence | MFPLGDDNSK LRRRGYVTYG LIALNVLVFL YEFSLGSESQ ALQDFIMTWG AVPERIAAGD
GLITLLTSMF LHGGWAHLIG NMLFLFVFGD NVEDAFGHGK YLAFYLITGL IATAAHILLN
LNSASAGIPS VGASGAISGV LGAYIVMFRS NSVKVLLGRF VQTVPAWMMI GLWAVQQFVA
TFATITTTSQ TSGGVAYAAH AGGFIAGVVL GFVLSRIQPA PQLAQRRKA
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