Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2508 |
Symbol | |
ID | 5734389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 3204249 |
End bp | 3205688 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641279648 |
Product | hypothetical protein |
Protein accession | YP_001545274 |
Protein GI | 159899027 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000331418 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGAC AAACCTGGAT ACGCCGAAGT GGAATTGTGG CTAGTTTGGT GCTAGCACTG TGGGGTTGTG GTGAATATAT CGCCCCAGCC ACCAAACTCA CGATTAATCC TAATGCCGAC TCAGGTGCTT ACTACCCAGC AATCTATGTT GATAACAACG ATCTACGACA CTATGCGTGG GCCGAATGTC AGGCAGGCAA TGGCTGCGAT TTAATTTATA CGCGGATGCG TGGCTCAAGT GAATTATTGC GGCAAACAAT TACGATCACC AATTCGACTG CCTCGCTGGT CTACCCAAGC CTAACTGCCG ATAACACTGA TACAATTCAT TTGGCCTACC TCAGCAATCA ACCAGTTCCT GCCAGAGGTG ATTCAACTTA CCGCTATTAT GCCGTCAGCA TCAGCCCCGA TGGTGCAACC ATCAGCCAAC CCGTTAATTT GCAAGGCGAA AGTATTAATA GTAGTTTGAT CAGCCCGATT GCAGTGCGCA ACAACGACGG CTCACATGTT GGTGTGCTTT ATACAATGCT TGACAGTAAT CAACAATCGT TAGTGTATCG CCAAATTGCC CCTAGCCTCA GCCAACCAGT TGTGATTGAA ACGGTTGCCA GCAATATCAT CTTAACCCAA CCACGGATCA GCATCGATGC TAATAATACG ATCCATGTGG TTTATGGCAA GCGCTCGCCG ATTTCGCCAA CTCGCAACTT GGGCGGTGAT CCAACCCTCG ATGAAATTCG TTACGCCCAT GGAACGCTGA TTGGCATAAC CGCTCGCACC GTTGATAGTT ATACCAGCGC CTCGGCCAGT ATTCCATTCG TCTATGATTT GACGCTGACT GACAAAGCCT ACGTGACCTA TATCAAACAT CCAAGTGCTA CACTGCGGGG CATTCCCACC GATAGTCTGC GCAGTCACAA TGCCACCGAT AATCTCACCA CCGATTTGGT GTTGCCATCG ATACTTGAGC CATGGAATAT TGGCGAAATT AGCACAGTTA ACAGTGGTTC AGGCCGCCCA ACTGTCTATT TTGCTGGCAC CAATAATACC TTCACCGATG CCTTTGCCTT TGATATTTGG CAATACGATG CCCAAGCAAG CGCTGCAATG AACCTCAGTA ATACAGCAAA TCGCTATGAA AACAACCTTG CCAGTAGCCA TTTTCATGCA CTTGATCTAG TTGCCTGGCA GGCCGATAGC TTTGATAGCA ACGGCTGTAC CACCCAAATC GTCAGCTATC GCAGCGATAT TGAGCAAACT AACGTTGCCG AGCAATTTCT CAATCCGTTG GGTTGTACAC CAAGTGTGCT GCAAATTAGT GCAGGCGACA AAGTTGCCGC TGGCGTGTGG ATTTCGGTTG CTCGCAATAA TGCCACTCTC AATGTACCAG CAACTGCATT CAATAGTTAT GGAACGTTTT TACCGATTGC TCAACGCTAA
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Protein sequence | MARQTWIRRS GIVASLVLAL WGCGEYIAPA TKLTINPNAD SGAYYPAIYV DNNDLRHYAW AECQAGNGCD LIYTRMRGSS ELLRQTITIT NSTASLVYPS LTADNTDTIH LAYLSNQPVP ARGDSTYRYY AVSISPDGAT ISQPVNLQGE SINSSLISPI AVRNNDGSHV GVLYTMLDSN QQSLVYRQIA PSLSQPVVIE TVASNIILTQ PRISIDANNT IHVVYGKRSP ISPTRNLGGD PTLDEIRYAH GTLIGITART VDSYTSASAS IPFVYDLTLT DKAYVTYIKH PSATLRGIPT DSLRSHNATD NLTTDLVLPS ILEPWNIGEI STVNSGSGRP TVYFAGTNNT FTDAFAFDIW QYDAQASAAM NLSNTANRYE NNLASSHFHA LDLVAWQADS FDSNGCTTQI VSYRSDIEQT NVAEQFLNPL GCTPSVLQIS AGDKVAAGVW ISVARNNATL NVPATAFNSY GTFLPIAQR
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