Gene Haur_2439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2439 
Symbol 
ID5734320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp3124232 
End bp3124861 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content50% 
IMG OID641279580 
ProductTenA family transcription regulator 
Protein accessionYP_001545207 
Protein GI159898960 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.576095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTTTA TGGATTATGC GGCGAATTTT TGGCAGGCAA ATCGTTTATT AGCCCAAGCT 
TGTTTGCAGC ACCCGTTTGT GCAGGGGCTG GCAACTGGCC AACTGAGCGT CGAACGCTTT 
GCCGATTATA TTGGCCAAGA TAGCTTTTTT CTGCAAAGTT TTGCGCGGGC GTATAGTTTG 
GCAGCGGCCA AAGCACCAAA TTGGGCGAGC GTGTGCACCT TTCATCAGCT AGCTGGCGGC 
GTGATCCAAG AGTTACAACT GCATCAAGCC TTTGCCGCCG ACTGGCAGGT TGATTTAAAT 
GTGGTGCAGC CCAACCCAGC GACCCAGCGC TACACCGATT TTCTGCAACT GACGGCGTGG 
TCGAGTGATT TGGGCACATT GGCGGCAGCG ATGGCTCCCT GTATGCGTTT ATATGCCTAC 
CTTGGACAGA ATTTAGCGAG TACCCAAGCC GCTAGTCAGC GCTATAGTGC TTGGATCGAA 
ACCTATAGCA GCAACGAATT TGAAGCCTTG GTAAGGCAAT TGGAGCAACT GGTCAATCAA 
CATAGCTACA ATTTGGCCAG TGCCGCTCAG GCCTATCGCT ATGCCATGCA ATGTGAATAC 
GATTTTTTTG AAGCAGTGTG GAGTAACTAA
 
Protein sequence
MVFMDYAANF WQANRLLAQA CLQHPFVQGL ATGQLSVERF ADYIGQDSFF LQSFARAYSL 
AAAKAPNWAS VCTFHQLAGG VIQELQLHQA FAADWQVDLN VVQPNPATQR YTDFLQLTAW 
SSDLGTLAAA MAPCMRLYAY LGQNLASTQA ASQRYSAWIE TYSSNEFEAL VRQLEQLVNQ 
HSYNLASAAQ AYRYAMQCEY DFFEAVWSN