Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2423 |
Symbol | |
ID | 5734304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 3106551 |
End bp | 3107666 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641279564 |
Product | riboflavin biosynthesis protein RibD |
Protein accession | YP_001545191 |
Protein GI | 159898944 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.413445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGGC TGATGAATCT GAATGTTATG CAGGCAGCGC TTGAACAAGC TGCGCTGGCG CTTGGTCGTA CTAGTCCGAA TCCGGCGGTG GGCGCGGTGG TGGTACAGGC GGGCCAAATT GTTGGGCGCG GCCATACTCA GCCAGCAGGC CAAGCCCATG CTGAGGTGAT GGCCTTGCGC GAGGCTGGCG AACAAGCTCG TGGTGCAAGT TTATATGTCA CCTTGGAGCC TTGCACGATT TGGGGGCGCA CCCCGCCTTG TACCGATGCG ATTATTGCCG CTGGAATTGC CGAGGTGATC ATTGCCTCGC GTGATCCCAA CCCGCGTTTC GAGCACGATG CGGCGACAGT TTTGCAAGCG GCAGGCATTC GAGTTGGCTT TGCTCCTGAA TATGAAGCGG CGGCAATTGG CCAGACTGAG GCCTTTCGCC ATTGGATTGT CACCAAACAG CCCTTTGTGA CGGTCAAATA TGCTATGAGT CTTGATGGCA AAATTGCTAC CCGCACTGGC GATGCCCGTT GGATTAGCGG GCCAGCTTCG CGCCAAAAAG TTCATGAACT GCGCGACCAA ACTGATGCAA TTTTGGTGGG TATCAACACG GTATTGGCCG ACGACCCCTT ATTAACCACG CGGCTTGAGC AACATTGGCG GCCAGTGCAA CACCCCGTGC GTGTTGTGCT CGATGCGCGT GGGCGCATGC CCGCCAGCGC GGCGATGTTG GCAGATGCTG TGCCTGGCTC AACGATTATT GCCACAACTG CCGCCGCTAG TGCTGCATGG CGAGCGAGCC TCAACAATGC TGAAATTCTT GAGTTGCCGA GCAATCTTGA GGGTCGGGTT TCAATTCCGG CCTTGTTGAA CGAGCTTGGT CAACGGGGCA TAAGCTCGTT AATGGTTGAG GGCGGTGGCG AAACGATAGC GGCATTTTTG GCGGCGCAGG CGGTTCAAAA AGTTCAGGTC GTAATCGCAC CCAAGATTAT TGGAGGAGTT GCGCCAAGTC CGGTTGCTGG AGTTGGCATT GCCCGTATGA GCGAAGCGCA GCTTTGGCAA GTACGCAGTA GTGAGCAAAT CGGGGCAGAT ATTTGGCTTA CCGCCTATCC CAACCCACAG GTATAG
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Protein sequence | MSRLMNLNVM QAALEQAALA LGRTSPNPAV GAVVVQAGQI VGRGHTQPAG QAHAEVMALR EAGEQARGAS LYVTLEPCTI WGRTPPCTDA IIAAGIAEVI IASRDPNPRF EHDAATVLQA AGIRVGFAPE YEAAAIGQTE AFRHWIVTKQ PFVTVKYAMS LDGKIATRTG DARWISGPAS RQKVHELRDQ TDAILVGINT VLADDPLLTT RLEQHWRPVQ HPVRVVLDAR GRMPASAAML ADAVPGSTII ATTAAASAAW RASLNNAEIL ELPSNLEGRV SIPALLNELG QRGISSLMVE GGGETIAAFL AAQAVQKVQV VIAPKIIGGV APSPVAGVGI ARMSEAQLWQ VRSSEQIGAD IWLTAYPNPQ V
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