Gene Haur_2402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2402 
Symbol 
ID5734283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp3061064 
End bp3061732 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content52% 
IMG OID641279543 
ProductDNA-(apurinic or apyrimidinic site) lyase 
Protein accessionYP_001545170 
Protein GI159898923 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000000142862 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAACC CTGAGAAAGT GCTTGAAACG TTACACATAT TGCGTGAACG CTTTGGTCCA 
CGCGTCTTGC ATACTCAACG TGATCCACTT GATGAGCTGG TTTTGACGAT TCTTTCGCAA 
AATACTTCCG ACCGTAATAG TGGTCGGGCT TTTCGCGAAC TCAAAGGGCG CTACCCAACG 
TGGGCGGCAG TGCTCAACGC CGAATCAAGC GAGTTAGAGG AAACAATTCG CGTTGGTGGG 
TTGGCTAAAA TCAAGGCGGC GCGGATTCAA AATACCTTGG CGGTAATTTT GGAGCAACGC 
GGCGAATTTA GCCTCGATTT TCTGCGCGAG CTAGGTTTGC ACGAAGCGCG GGCTTGGCTG 
ACCGCACTGC CGGGCATTGG CCCCAAAACG GCGGGCTGTG TGCTCTGTTT TGCCTGCAAT 
CAGCCCGCCA TGATCGTCGA TACCCACATT CATCGCGTGG CCAAACGGGT TGGCATGATT 
GGGCCTAAAG TTTCTGCCGA TGCTGCCCAC GATTTGCTTG AGTCGGCTGT GCCAGTTGAT 
CAAATGTATC AATTTCATGT CAGTGTGTTG TTGCATGGCC GCCAAATTTG CCATGCCCAA 
CGCCCAGCCT GCGAGCGCTG CCCATTAACC GAGATTTGCG ATTTTTATCA AGCCAATTCA 
ACATCATAG
 
Protein sequence
MLNPEKVLET LHILRERFGP RVLHTQRDPL DELVLTILSQ NTSDRNSGRA FRELKGRYPT 
WAAVLNAESS ELEETIRVGG LAKIKAARIQ NTLAVILEQR GEFSLDFLRE LGLHEARAWL 
TALPGIGPKT AGCVLCFACN QPAMIVDTHI HRVAKRVGMI GPKVSADAAH DLLESAVPVD 
QMYQFHVSVL LHGRQICHAQ RPACERCPLT EICDFYQANS TS