| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2296 |
|---|
| Symbol | |
|---|
| ID | 5734183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 2936630 |
|---|
| End bp | 2937658 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641279437 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | YP_001545064 |
|---|
| Protein GI | 159898817 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0948081 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATC GTCAAATTGC CCTCTGGAAT GAAGAACGTG AACAGCGCAA GCGAGCCTTG
CAACGTATTT TGATTACTGG CAGTAGTTTT ATTTTCCTAC TGATTTTATA TTATGTGTTC
GGGGTTGATC TCAGTGTTGG CCGCAATCAG CTAGCGCTCG GCTGTTTGAT TGGAGTGCTG
GTTGCCGCCG CGATTTCGGG CTGGCTGGTC AGCATCGATC AGCCAGAATG GGCCACCCAC
GCGATGTTTA TTCCCTACAT GCTGATTATT TTGGTGGTGG CAACTCCGGT CGGGGTAACG
AGCCGTGGCA TGTATGGGTT ATTTATTCCA ATTGTAGCGG CGGCACTGCT CTTGCCAGCC
CGTTGGAGTC TAATTTATGC AGCGCTGGCA GTGGTAGTTT TCGTCAGCAC CGATATGTTA
AGCCCTCAGC CATTTTCATT AAATACAACT ATTCTGAATA CATTGTTCGC AGGCGGATGT
TTTGGCACCG CCGCCGCTAC CACTTCGTTT ACTGCCCGCC GCTTACGCCA ATTGCTCAAA
ACTAGCATTG AACATAGCAA GGAGCTTGAG CGCAATCAGG CGGTGCTTGA GGAACGAGTA
CAAAAACGCA CGCTGTATCT TGAAAAAGCG CTCGATGAAT TACAACGCTC CAGCGAGACG
ATTCGCCAAA TGAGTGTACC AGTGCTGCCA ATCGCCGAAC GGGTTTTGGT GTTGCCGCTG
GTTGGCAGCA TTGACCTCTC ACGGGCGGCC TTGCTCAGCG ATGAACTGCT GAATACAATC
TATCAACGCC GCCCACATAC AATTTTGATC GACTTAACGG GATTAACGAC GATTGATCAG
GTGGTGGCTG AATCGTTGGT ACAAACCTTG AGTGCGGTGC GCTTGCTTGG CACCGAGCCA
ATTGTGGTTG GTTTACGCAG CGAAACCGTC CAAGCCTTGC TCGATACCGG CATTGATATC
AGCCATATTC GCACCTTCCG CGATGTGCAA AGTGGGCTGG GTTACGCCAC CAGCAAAATT
AGTTATTAA
|
|---|
| Protein sequence | MADRQIALWN EEREQRKRAL QRILITGSSF IFLLILYYVF GVDLSVGRNQ LALGCLIGVL
VAAAISGWLV SIDQPEWATH AMFIPYMLII LVVATPVGVT SRGMYGLFIP IVAAALLLPA
RWSLIYAALA VVVFVSTDML SPQPFSLNTT ILNTLFAGGC FGTAAATTSF TARRLRQLLK
TSIEHSKELE RNQAVLEERV QKRTLYLEKA LDELQRSSET IRQMSVPVLP IAERVLVLPL
VGSIDLSRAA LLSDELLNTI YQRRPHTILI DLTGLTTIDQ VVAESLVQTL SAVRLLGTEP
IVVGLRSETV QALLDTGIDI SHIRTFRDVQ SGLGYATSKI SY
|
|---|
| |