| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2243 |
|---|
| Symbol | |
|---|
| ID | 5734130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 2859799 |
|---|
| End bp | 2861124 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641279384 |
|---|
| Product | cytochrome bd ubiquinol oxidase subunit I |
|---|
| Protein accession | YP_001545011 |
|---|
| Protein GI | 159898764 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0392435 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCT TGACCGCAGC ACGGGCGCAG ATGGAGGTCT CGCTCGCGTT TCACATGGTT
TTTGCGGCGT TGGGCATTGG CTTTCCCTTG CTCATGGTCA TCAGCGAGGG CTTGGGCTTG
AAAACGGGGC AAGCTCATTA TCTCGCACTG GCAAAGAAAT GGGCTAAAGC GACGGCGCTT
ACCTTTGCAA TTGGCGCTGT TTCAGGCACC GCGCTAGCAT TCGAGCTAGG GTTGCTTTGG
CCGACCTTTA TGGGCTTTGC AGGCAGTATC ATTGGCTCGG CCTTCACGCT CGAGGGCTTT
GCCTTTTTTA TCGAAGCGAT TTTCCTTGGC TTGTATCTTT ATGGTTGGAA GCGGCTCTCG
CCACTAGCTC ACTGGCTCAC TGGCATTCCA GTCGCAATCA GTGGGATGCT TTCAGGCGCA
TTGGTGGTGG CGGCCAATGC GTGGATGCAA ACACCAGTTG GCTTCGATTT AGTTGATGGC
AAGGCGGTGA ATGTTAATCC GCTGGCCCCG TTTCTCTCGC CTGCTTGGCT CGATATGGCT
TTACACTCAA CCCTGTCGTG CTATATCGCA ACTGGTTTTG CCGTGGCTGG CGTATATGCG
ATGGGCTTGC TCAAAGGCCG TAACGACCAC TATCATCGCT CAGCCTTGAC AATTAGCTTG
GGCTTGGCGA CCGTCACCGC CTTGTTGCAG CCAATTAGCG GCCATATCAG TGCCCAACGC
GTTGCCAAAG ATCAGCCTGC CAAACTAGCA GCGATGGAAG CCTTATTTGA AACCCAAGCT
GGCGCACCGT TGTTGATCGG CGGAATTCCC GACCCTGAAA CTGGCGAGAT TCACTTTGGA
ATCGAAATTC CTAAGGCGCT GAGTTTTATG GCAACCAACG ATTTTAACGC CGAATTACGG
GGGCTAAATA GCTTTCCACC TGACGAACGC CCAAATGTGG TGATCACCCA TATTGCCTTT
CAGGTGATGG TTGGAGCTGG CTTTGCCTTG ATTGGCTTAG GCTTGTGGTT TTGGTGGCGG
CGTTGGCGTG GCAATCTTGC TCTGAGTCGC AAACTATTAT GGGCCTTGGT TTTTGGCTCG
CCATTGGGTT TTATCGCCTT ACAAGCGGGC TGGATTGTGA CCGAGGTTGG CCGCCAGCCG
TGGATCATTT ATGGAGTGAT GCGGACTCGC GATGCGGTAA CTACGGTCGC TGGTGTGCCG
CAGGTGTTTT ATCTGTTTAG CTTGCTCTAT ATTGGCCTTG CAAGTGTACT CGTGTATTTA
TTACGTCAAC TTGCTACGGG CTATCCTGCC GAAACTAGCG AAAGTGAGGC AACCCATGCC
GCTTGA
|
|---|
| Protein sequence | MDTLTAARAQ MEVSLAFHMV FAALGIGFPL LMVISEGLGL KTGQAHYLAL AKKWAKATAL
TFAIGAVSGT ALAFELGLLW PTFMGFAGSI IGSAFTLEGF AFFIEAIFLG LYLYGWKRLS
PLAHWLTGIP VAISGMLSGA LVVAANAWMQ TPVGFDLVDG KAVNVNPLAP FLSPAWLDMA
LHSTLSCYIA TGFAVAGVYA MGLLKGRNDH YHRSALTISL GLATVTALLQ PISGHISAQR
VAKDQPAKLA AMEALFETQA GAPLLIGGIP DPETGEIHFG IEIPKALSFM ATNDFNAELR
GLNSFPPDER PNVVITHIAF QVMVGAGFAL IGLGLWFWWR RWRGNLALSR KLLWALVFGS
PLGFIALQAG WIVTEVGRQP WIIYGVMRTR DAVTTVAGVP QVFYLFSLLY IGLASVLVYL
LRQLATGYPA ETSESEATHA A
|
|---|
| |