| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2233 |
|---|
| Symbol | |
|---|
| ID | 5734120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 2840365 |
|---|
| End bp | 2840982 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641279374 |
|---|
| Product | CRISPR-associated Cas4 family protein |
|---|
| Protein accession | YP_001545001 |
|---|
| Protein GI | 159898754 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1468] RecB family exonuclease |
|---|
| TIGRFAM ID | [TIGR00372] CRISPR-associated protein Cas4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.874224 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAT TTGAGCCAGA TTATATACCG ATTTCCATGC TAAACGCTTT AGCCTATTGC
CCACGCCGCT TTGGCTACGA ATATCTCCAA GCCGAGATGT TGATTAATGA ATTTGTTGCT
GATGGCCAGA TTTTGCATAG TAGTGTTGAT GCAGGGGGCC GAACGTGGAT CGCTGGGGAA
GTGCAAGAAC GCTCAGTCTA TGTTTGGAGC CAACGCTGGC GCATCACTGG CATCGTCGAT
CTGCTCGAAA GCGATCGGGG CGAATTCTGT CCAGTGGAAT ATAAACGGGG CAAACTCGCC
CAGCGACGCA ATGATCATGT GCAGTTATGT GCCCAAGCCT TATGTTTAGA AGAGATGTTT
GGCTGTGAGG TTAACCAAGG CTTTATTTTT TCGTGGGCCA ATCGGCGGCG CGAGCAAGTT
GCCTTTGATC CTGAACTACG CCAAAAAACC ATTGCGATCA TTGAGCAAGC CCATGCAATC
TGTCAGCGTG GTGAATTACC AGCCCCAACC AGCCAAAAGG GCAAATGTCG TGATTGCAGT
CTAAAACCAT TATGTTTACC CGATGAAGTG GCGTATCTCA CGACCCATCC ACATTTAACC
ATCGATGCTA TCGATTAA
|
|---|
| Protein sequence | MNEFEPDYIP ISMLNALAYC PRRFGYEYLQ AEMLINEFVA DGQILHSSVD AGGRTWIAGE
VQERSVYVWS QRWRITGIVD LLESDRGEFC PVEYKRGKLA QRRNDHVQLC AQALCLEEMF
GCEVNQGFIF SWANRRREQV AFDPELRQKT IAIIEQAHAI CQRGELPAPT SQKGKCRDCS
LKPLCLPDEV AYLTTHPHLT IDAID
|
|---|
| |