| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1930 |
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| Symbol | |
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| ID | 5733819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 2336727 |
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| End bp | 2339702 |
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| Gene Length | 2976 bp |
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| Protein Length | 991 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641279074 |
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| Product | transcriptional activator domain-containing protein |
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| Protein accession | YP_001544701 |
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| Protein GI | 159898454 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family
[COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.816243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTTT GCTTTTTTGG CCTTGTGCGT GCCACATTCA ACGATCAACC GCTGCAATTT
CGCTCGAATA AAGTTCGGGC ACTTTTGGCG ATTATCTGGC TTGATCCGCG TCGCCAGTGG
GCACGAGATG AGCTGGCAAG CTTGCTTTGG GAAGATTATT CGAGCAGCAA AGCTCGCACT
AATTTGCGCG TAACCTTTTC GCAACTACAA CAAAGCCTGC ATCCGTTGTA TCAGGCCTTG
CCTGCGCGTG CGCCGTTGTT GGTCGCTGAT CGGGCACGGA TTGCGCTGCA AGCCGAAGCA
TGGCCCGAAT TGCAGGTTGA TGTCTGGCGG TTTGATCAAG CAATTGCCGC CTACCACACT
CATAACCATG AGCATGGAGT GATATGTGCT GCTTGTCTTG AACAATTAAC GAGCGCAGTT
GAGTTGTATC AGGGCGATTT GTTGACTCCC TTTGCGATTG AGGCGAGTAG TGGCTTTGAT
GCGTGGCTGG AACGCCAGCG CGAGGCACGA CATCAACAAC TGCTGCTGGC CTACGATGTT
TTAGCCGAGC ATGCCCTGCG AATGCGCGAT TTTCATGAAG TTCAGCGGCT TTCAACCGCC
CAATTGCTGC ATTTACCTTG GCATGAGCAG GCTCATCGGC GCTTGATGAT TAGTTTTGCC
GAGTTGGGCC ATCAGAGTAT GCTGCGCGAA CAGTATTTGC TCTGCCAACG AACGCTTGAG
CGCGAACTGG GGATTGGCCC TGATGCGGAG ACCCAAGCCC TTTACCAGCG TTTAGTCACA
ACTTCGACCA CGCTGCCCCT GCCTAATCCA ACTCTAAAAA CCTTGCCTGA ACTAAGCAAA
CCATTGATTG GCCGAACCCA TGAATTAGCG CTCTTGCACA GCTTGATTGA GCAAAAACAG
CAACGTTTGG TGACCTTGCT CGGCTTGGGT GGCATCGGCA AAACAAGCTT AGCCTTGGCC
TATGCTCATG CTGCCCAAGC GGCTTTCGAT GCTGTGTGGT TTGTGAGTTT TGCGGGTAGT
GCTGGCGAAT CACTCGCATC CGACCACCAT CGGCTTAGCG CAACCATCGC GACGACACTG
GGGTTGTCGC AACAACTGCA CACGCCCCAA GCAGCCTTGC TACATTACCT TGGGCAGCGC
TCGGTCTTGT TGGTTTTGGA TAATCTTGAG CATTTGGTGC ACGAGGCGCT GCATGTGCAA
GCAATTCTGG ATGCTTGCCC GCATGTGGTG GTGCTGGTAA CTTCACGCGA ACCACTCAAT
ATTCAAGCTG AGCAGCGGGT GCAACTGCAT GGTTTGGCTT TGGCAAATGC TGATCAAGCG
TTCGCAGCCA GTGCTCAATT ATTTCTGGCA CATGGAACCA ACGCTACCAG CCAAACCTTG
GCCGATCCTG CCAGCATGGA ATGGATCGAT CGGATTTGTC GCATGCTTGA TGGTAATCCA
TTGGCAATTG AATTGGCCGC CCGTTGGGTG CACTATCTTG GGTTGGATGA AATTGCCACG
GCGATTGAGC AGGATATGGA TTTTCTACAA ACTAGCGTGC GTGATTTGCC CGACCGTCAT
CGCAGTATGC GAGCGGTGTT TGATGGCTCG TGGCGCTTGC TTTCGCGTCA TGAACAGCGC
GTGCTCAGTC AGGCTAGTTT GTTTCGGGGC AGTTGGTCGC TCACGGCGAT GCGCAGTATT
TGCACGGTGT CGCGGCTGAC CATTCGCGAG CTGATCGATA AAAGTTGGCT AACTCAGCAT
GCAGGCCGCG CGATGATCCA TCGTTTGATT CAACGCTATG CCCATGAACA ATTGCAACGC
ATGCCGACTA CCGCTGCAAC GACTGCAAAA CGCCATAGTA TTTACTACTT GGCCATGCTT
CGGCGGCATA CTCCCGCACT CAGTGGCTCG CAACCACAAG CGAGCGTTCG ACTGTTACGC
GACGATCTTG ATAATATTCG TCAAGCTTGG CTTTGGGCGG TAGATCATGG CGCAACCCAT
TTGGTGCATG CAAGTCTGGC TGGTTTATCG CAACTCTACG ATCTTTTAGG CTTGTATCAC
GAGGCGATTC GCGTGCTGCA AACCAGCATC ACCCAGATTC AACGCCAACC AACCAGCCTA
CAGCAACAAC GCCTGCTGAT GCGCTTGACG ATTGCGCTCG CCAGCCATTT CAATGCAGCG
GCAGATTATC GGACTGCCGC ACAGGTTGGG CAACAGGCCT TGGATTTAGC TCAGACCCTT
GATGTTCCGC AGCAGATAGC CGCCTGTTTG TTGCAAATTG GTATTGCCCA ACGCAATTAT
GGTTTGTTTG CTGACGCCGA ACAAAGCCTT CAGCGCTCGA TCGCGATTGC CCAAGCGTTG
CCGTTGAAGC AGGTCTATGC CCATGCGCTG CGTAGTTTGG GCTTTTTGGC CTATCTCCAA
GGCAATTATC CCGTGGCGTT GCGCTACCAC GAGCAGGCGT TGGCGTTTTA TCGGTTGCTT
CACGATCAAC GGAGTATTAA TTTGGCCCAA AATACCTTGG GCTTAATTGC GCTTGCTCAG
GGCGATCTTC AGCAGGCGTG GGACCAATTG GCGGTAGTAT TGACGCGTTG TCAAACGCTT
GAAGATGGTT GGGGCGAGGC TTTGACCCTG AATAATCTGG GAGCTGTGGT GCAGGCTCAG
GGTGATCCAG CTCGCGCGAT CGATTATTAT CAAAAGGCAT TAAGCATTCG CCAACGGATT
GGCGATCGTT GGGGCGAGGG CATTAGTCTG AGCAATCTGG CGGCGGCATG GCACGAGCAG
GCAGATTACC AAACTGCCTA TCAAAGCGCA ATGCAAGCCA TTCAGCATAC CACTGCAATT
CATGATTTGC CGACCAAAGC CTATGCCTTG ACCACCCTTA GCCAGATTCT GCGGGTACTG
GGCGATCAGG CTGGGTCAAT CGCCGCCCGA TCAGAGGCCA CAACATTGCG CACCCAGCTT
GGACAAGATC ATTTAATTAG TCAAACCATT GATTAA
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| Protein sequence | MQFCFFGLVR ATFNDQPLQF RSNKVRALLA IIWLDPRRQW ARDELASLLW EDYSSSKART
NLRVTFSQLQ QSLHPLYQAL PARAPLLVAD RARIALQAEA WPELQVDVWR FDQAIAAYHT
HNHEHGVICA ACLEQLTSAV ELYQGDLLTP FAIEASSGFD AWLERQREAR HQQLLLAYDV
LAEHALRMRD FHEVQRLSTA QLLHLPWHEQ AHRRLMISFA ELGHQSMLRE QYLLCQRTLE
RELGIGPDAE TQALYQRLVT TSTTLPLPNP TLKTLPELSK PLIGRTHELA LLHSLIEQKQ
QRLVTLLGLG GIGKTSLALA YAHAAQAAFD AVWFVSFAGS AGESLASDHH RLSATIATTL
GLSQQLHTPQ AALLHYLGQR SVLLVLDNLE HLVHEALHVQ AILDACPHVV VLVTSREPLN
IQAEQRVQLH GLALANADQA FAASAQLFLA HGTNATSQTL ADPASMEWID RICRMLDGNP
LAIELAARWV HYLGLDEIAT AIEQDMDFLQ TSVRDLPDRH RSMRAVFDGS WRLLSRHEQR
VLSQASLFRG SWSLTAMRSI CTVSRLTIRE LIDKSWLTQH AGRAMIHRLI QRYAHEQLQR
MPTTAATTAK RHSIYYLAML RRHTPALSGS QPQASVRLLR DDLDNIRQAW LWAVDHGATH
LVHASLAGLS QLYDLLGLYH EAIRVLQTSI TQIQRQPTSL QQQRLLMRLT IALASHFNAA
ADYRTAAQVG QQALDLAQTL DVPQQIAACL LQIGIAQRNY GLFADAEQSL QRSIAIAQAL
PLKQVYAHAL RSLGFLAYLQ GNYPVALRYH EQALAFYRLL HDQRSINLAQ NTLGLIALAQ
GDLQQAWDQL AVVLTRCQTL EDGWGEALTL NNLGAVVQAQ GDPARAIDYY QKALSIRQRI
GDRWGEGISL SNLAAAWHEQ ADYQTAYQSA MQAIQHTTAI HDLPTKAYAL TTLSQILRVL
GDQAGSIAAR SEATTLRTQL GQDHLISQTI D
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