Gene Haur_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1897 
Symbol 
ID5733786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp2288693 
End bp2290765 
Gene Length2073 bp 
Protein Length690 aa 
Translation table11 
GC content48% 
IMG OID641279041 
Productextracellular solute-binding protein 
Protein accessionYP_001544668 
Protein GI159898421 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4166] ABC-type oligopeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000383854 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAGA AGCCAAAAAC CCTGTGGAGC TTGATTGCGC TCCTGATTCT CGTCTTGCCA 
CTCTTAGCAG CCTGTGGCGA TGCCGCCTCA ACTGCAACCA CCGCGACCGA CTCAACCCAA
CCAACTACTG CTAGCGATTC TTCAGCAACA ACTACCGCTC CAACCGCCGG CACTGATTCC
CAGCCGACAA CTGGCAGTAC AGATGTTAAA GATGTGACGG TAACCTTACC ATTCCAACAA
GGTGGCATTA CCAGTCTTGA CCATGCCTAC TGGTCAGCTC AATTGTTTGT CTCACAAGGC
GTTGTGTTCG AAGGCTTATA TGGCTACGAT CAACAATTGA ACATCGTGCC AAAAATTGCC
GAAAGCGCTA CTCCTTCAGC CGACAACCTC GTTTGGACGA TCAAACTGCG TAAAGACAAA
AAATGGTCGA ATGGCGACCC CGTTACCGCT AAAGATTTCT ATGCTGCTTG GGTTCGAGCA
GCTGGCCCAG AATTAAAAGA TGCTCCAATG TGGGCAGGCA TGATGGGCTA TGTCAAAAAT
GGTTATGCCT TCAAGGCTGG CGCAGTTGGT GTCGATGAAG TCGGCTTCAA ATTGATCGAC
GATTACACGA TCGAAGTGAC CTTGAGCCAA CCAAACGCTG CATTTATCAA CTTCTTGCCA
GTTATGAACG CCATGCCAAT CAATGCCAAG AGCTTGGAAG CCAACCCTAG CGATTGGTTT
GACCCCAAGA ATGCGGTCTA TAACGGCCCA TACATTGTTG AATCGTGGGT CAGCGGCGGC
GATATTGTGC TCAAGCGCAA CCCCAATTAT GTTGGCGAAG GCACTGGCAA CGTTGGCACG
ATCGTGTTGC GGCCTTACGC CGATGCTAAT GCTCGCTTGC AAGCCTTTGA AAACCAAGAA
ATTCAATTCA CCTTCCTTGA AGATGCTAGC CAATTGGCCT ACGCTCAAGG CAACCCCGAC
ATCAAAGACA ACATCAAGAG CGAAGAAAAC CCAATCGTTT GGAAGGGTAT TCAATACAAT
CGTTCATTGA ATGCTGGCCC ATTGCAAGAT GTGCGGGTGC GCCAAGCCTT CGCGTTGTCA
ATCGACAAAA AAGCTATCAC CGACCAAATT TTGAAGGGCT TGGCAGTCCC AACCGATACC
TTCAACAGCG ACGTACGGGT CAAGGATAAA GTTAAGAGCT TAAGCTATGA TGTCGCTAAA
GCCAAGCAAT TGCTGGCCGA AGCTGGCTAT CCCGATGGTG CTGGCTTCCC TGAATTGACC
TTCTACGCGC CACCATCAAA CGACCCACAA ATGCCTTGGA TTGAAGCCGT CGCCAAGATG
TGGCAAGATA ATTTGGGCGT GAAGGTTGTG ATTCAAAACA ACGAAGGTCC AGTTTACTCA
AACATCCAAT GGTCGAACTA TAACAAAGAT ATTCAACCAG GCTTTGCGAC CCTTGGCGGC
CCAATGAACT GGTTCCAACC ACTCGACTTG ACCTTGGCTA CCAACCATAT TTGGTACTTC
ATGGACTTCA AAGAAGGTGG GATGGCTAAG TTCGCTGAAT ACCAAACCCA AATCGATGCT
GTCAGCAGCA CCGAAGCCGT TGGCGATTGG GCTGATTTGA CCGCTCGTGC TGAAGCTGCT
TGGACTAAGC GCCAAGCTAT CAGTAAAATT GAAGAGCCAG AAATGGCTAA AATTTCAGCT
AAAGCTCCTG AAGCTCCCAG CTTCAAAGAT CAATGGGATG CAATCAACGA ACGCTTTACT
GCTGCTAAAG ATGATGCTGA AAAGCTGACT GCCTACAAAG ATGGCTTGTT GTTGGTCTTG
AAGGAAGAAC AAGACGCAAC GTGGTATGAT TATCGTACCG AAGAAAACAA ACAAGCCCAA
CGCTTGATGA TCAAACTGGC TGGCCAAACG CTCGATGACG CTTGGCAAAC CTTGCCCGAA
ATTCAACAAT TGGCAATCGA CTCAGCTTGG ATGATCCCCA TCTACTACGA CAAGTTGTAC
TACGCAACCG ATCCACGACT CTCAGGCATT GTGATCAACA AACTCTCGTG GGGCGGGATC
TTCCAATATC AATATTTACA GTGGACTGAA TAA
 
Protein sequence
MVKKPKTLWS LIALLILVLP LLAACGDAAS TATTATDSTQ PTTASDSSAT TTAPTAGTDS 
QPTTGSTDVK DVTVTLPFQQ GGITSLDHAY WSAQLFVSQG VVFEGLYGYD QQLNIVPKIA
ESATPSADNL VWTIKLRKDK KWSNGDPVTA KDFYAAWVRA AGPELKDAPM WAGMMGYVKN
GYAFKAGAVG VDEVGFKLID DYTIEVTLSQ PNAAFINFLP VMNAMPINAK SLEANPSDWF
DPKNAVYNGP YIVESWVSGG DIVLKRNPNY VGEGTGNVGT IVLRPYADAN ARLQAFENQE
IQFTFLEDAS QLAYAQGNPD IKDNIKSEEN PIVWKGIQYN RSLNAGPLQD VRVRQAFALS
IDKKAITDQI LKGLAVPTDT FNSDVRVKDK VKSLSYDVAK AKQLLAEAGY PDGAGFPELT
FYAPPSNDPQ MPWIEAVAKM WQDNLGVKVV IQNNEGPVYS NIQWSNYNKD IQPGFATLGG
PMNWFQPLDL TLATNHIWYF MDFKEGGMAK FAEYQTQIDA VSSTEAVGDW ADLTARAEAA
WTKRQAISKI EEPEMAKISA KAPEAPSFKD QWDAINERFT AAKDDAEKLT AYKDGLLLVL
KEEQDATWYD YRTEENKQAQ RLMIKLAGQT LDDAWQTLPE IQQLAIDSAW MIPIYYDKLY
YATDPRLSGI VINKLSWGGI FQYQYLQWTE