| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1828 |
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| Symbol | |
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| ID | 5733716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 2122807 |
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| End bp | 2125023 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641278971 |
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| Product | ABC transporter related |
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| Protein accession | YP_001544599 |
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| Protein GI | 159898352 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0155639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAGTA AGACGTTAAT TTACCGCCGC TTACCATGGA TTCGTGCTTC AGAAGGCCGC
GATTGCGGCC CCTCGGTTTT TGCATCAGTA GCGCATTTCT ACAAGCATCG AATTACCTTG
GAGCAAGCAC GGTCTTTGGT TGGAGCCGAT CGCAATGGTA CAAGTTTGGC AGGTTTGCGT
GATGGAGGCC GCGCAATTGG GCTTGAATCA CGGCCTGCTC AAGCGATTTA TAGCGCATTG
CAACATATCC AATTGCCAGC GATTGCCCAC CTCAAGGGTG GCGAAGGCCA TTATGTGGTT
ATCCATAAAT GGTCGCCAAC CTCAGTGGTT GTGCTAGACC CTAGCCGTGG TCTGCGCACG
CTCAGCAAAG CTGAATTTGA GGCCATGTGG AGTGGTTATT TAGTTGAATT TAAGCCTACC
GCAGCGCTCA AACCTCGCGA GATCGATGTT AAGCCCTTCA AAACCCTGTT GCAGCTCGCC
CGCCAACATA AACTTATGTT AGGAATTGTG CTCTTCTTCG CCTTGCTAGC AACCTCGTTA
GGCTGGGTAA CCTCGTTTTT TATGCAAATA TTGATCGATT CGATTATCCC AAATCGTGAT
CAAGCATTAC TTTTTGCCTT AGGTCTAGGG TTAATTTTGG TCAGTGTTTT CCAATCGACA
CTCCAATTTG GGCGTTTATG GCTTAGTGCC AAGGTTGGGC AGCATGTCCA CCAAGCCTAT
TCAGCTCAGT ATATTGATCG TCTGTTACGC CTACCAATGA AAGTATTTGA TGTTCGTTGT
ATCCCTGGAC TGGTGTTGCG GGTTACCCAA GCCGATGGGG TGCAATTAGC GCTTTCTGAA
GGATTGATTA CGATTTTGGC CGATGTAGCA ATGTTTGTAA CTGCATTAGG CATTATCGCA
TTCTATAACC CAATTGCGGC CTTGATCGCA GCAGCTGCCT TACCACTTGT TTGGTTTGTC
TTATTCGCGT TGAATGATCG GGTGTATAAC GCTCAATTAG CCGCAATCAT TCGGATGGAA
GAATTCACCT CGCAGATGGT CGATGTATTT GATTGTGTAC GAACAATCAA GGTTTTTGGC
GCAGAAGAAC AATATAAAGC TTTACTCAAC GAAAAATTGG CTAATTTCAC AAAATCTCGT
ATGGATAGCC GAATTAATAT CGCCCTGCCC AGCGCATGGA GCGTTTTAGC AACCTCATTA
ATTACTGCTT CAATTTTATG GTACGGCAGT AGCCAAGTAT TTGCTGGGCG CATGACTCCA
GGTGAGTTAG TTGTTTTGTT TGGAATGGTC GCATTTTATC TCCAACCAAT CCAGCGTTTA
CCTGCCACAA TTCTCAATCT GCGCACAGCG TTATTGGGCA TTGAACGGAT GGATGAAATT
ACCACCTTAC CAGACGAAGC TTCACGAACC AGCGAACCAA TCGCATTAGC TGAAGTCAAG
GGCGAAATTA AGTTCAATGA TGTGCATTTT GCCTATATGC GCAACAAAAT GGTGCTAAAA
AAGCTCAATT TTGAAATCAA GCCTGGCGAA ACTGTAGCAA TTGTTGGTGA AACTGGCTCA
GGTAAAACCT CGTTGGCTAA TTTGATCGCA GGTTTTTATC TCCCAACCCA CGGCGATGTA
TTAATTGATG GCATTAGCAC GCGCAATATC GACCCCGATG AATTACGACG CTCAATTAGT
GCCGTCTTTC AAAATACGCG GCTGCTGCAA CAATCAATTC GCGATAACAT CACCCTGATG
CGTGATACCG ATTTAGAATT AATTCGCAAT GCCGCCAAAA TTGCTCAGGC CGATGAATTT
ATTGCAGGCC AAATGTATGG CTACGAATCG CAAGTGGCAC GTGGTGGTGA TAATTTCTCT
TCTGGTCAAG GCCAACGCAT AACGCTTGCC CGCGCATTGC TCAAAAATGC ACCGATTTTA
ATTCTCGATG AAGCTACCAG CAACTTGGAT AGCGCCACCG AACAAGGGTT TTTACAAGCC
CTCGAAGATA ATCGGGCTGG TCGCACCACC GTGGTGATTG CCCATCGTCT GAGCACCATT
TTACGGGCCG ACCGCATTTT GGTGATGGAG AATGGCGAAA TTATCGAATC GGGCAGCCAT
GACCAACTTG TAGCCCAAGC TGGCCATTAT TACAACTTGA TCAAAGGCCA GATTACCAAG
CCCGCTCCCG AGCCAATTGT CATGCCTGAA ACCCATTTGA ACCAACTCGC GGCCTAG
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| Protein sequence | MLSKTLIYRR LPWIRASEGR DCGPSVFASV AHFYKHRITL EQARSLVGAD RNGTSLAGLR
DGGRAIGLES RPAQAIYSAL QHIQLPAIAH LKGGEGHYVV IHKWSPTSVV VLDPSRGLRT
LSKAEFEAMW SGYLVEFKPT AALKPREIDV KPFKTLLQLA RQHKLMLGIV LFFALLATSL
GWVTSFFMQI LIDSIIPNRD QALLFALGLG LILVSVFQST LQFGRLWLSA KVGQHVHQAY
SAQYIDRLLR LPMKVFDVRC IPGLVLRVTQ ADGVQLALSE GLITILADVA MFVTALGIIA
FYNPIAALIA AAALPLVWFV LFALNDRVYN AQLAAIIRME EFTSQMVDVF DCVRTIKVFG
AEEQYKALLN EKLANFTKSR MDSRINIALP SAWSVLATSL ITASILWYGS SQVFAGRMTP
GELVVLFGMV AFYLQPIQRL PATILNLRTA LLGIERMDEI TTLPDEASRT SEPIALAEVK
GEIKFNDVHF AYMRNKMVLK KLNFEIKPGE TVAIVGETGS GKTSLANLIA GFYLPTHGDV
LIDGISTRNI DPDELRRSIS AVFQNTRLLQ QSIRDNITLM RDTDLELIRN AAKIAQADEF
IAGQMYGYES QVARGGDNFS SGQGQRITLA RALLKNAPIL ILDEATSNLD SATEQGFLQA
LEDNRAGRTT VVIAHRLSTI LRADRILVME NGEIIESGSH DQLVAQAGHY YNLIKGQITK
PAPEPIVMPE THLNQLAA
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