| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1744 |
|---|
| Symbol | |
|---|
| ID | 5733631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 2030562 |
|---|
| End bp | 2031353 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641278886 |
|---|
| Product | uroporphyrin-III C-methyltransferase |
|---|
| Protein accession | YP_001544515 |
|---|
| Protein GI | 159898268 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0007] Uroporphyrinogen-III methylase |
|---|
| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACGCG AAGGATTTGT TGCATTAGTC GGGGCTGGTC CAGGCTCCGC CGATTTAATT
ACCGTCAAAG GGTTGCGCCG TTTGCAAAGT GCCGATGTCG TGGTATTCGA TGCCTTGGTG
TTGCCCGAAT TATTGGCCGA AGCTCGTAGC GATGCCGAGT TGATTCCGGC TGGCAAGCGT
GGCGGCCAAC ATTCCGTCAG CCAAGATTGG ATCAACGCAA CCTTGATTGA GCACGCTCAG
CAAGGTAAAT TGGTGGTTCG ACTCAAAGGC GGCGATCCAT TTGTATTTGG GCGCGGTGGC
GAGGAAGCTG CTGCCTTGAG CGCTGCCGGA ATTGCATGGG AAGTTGTGCC CGGCATTTCT
TCGGCGATTG CGGCCCCTGC CTATGCGGGC ATTCCAGTGA CTCATCGCGA TGTGGCTTCA
TCGGTTGTCT TTGTGACAGG TCATGAAGAT CCAACCAAGC CAACCAGCCG CATCAATTGG
CAAGCCTTGG CCCAAGGTGT TGATACCTTG GTCTTTTTGA TGGGAATTAC GCGAATCAAC
CACACAGTTG CCAGTTTGAT TGCCAATGGT CGCCCTGCCG ATACTCCAAC GGCGGTGATT
CGCTGGGGCA CAACTGCTGA TCAAAAAACG GTGGTCGCAC CACTTGATCA AATTGAGGCT
GCGGTTAAAG CGGCTGGCAT CGGCGCACCA GCGATTTTAA TTGTGGGCGA AGTTGTGGCG
TTGCGTGAAC AACTTAATTG GTTTGAATCG ACAGTGCTTG AAATGCCCGA AGTTGTCCGA
GCATTTGCCT AA
|
|---|
| Protein sequence | MTREGFVALV GAGPGSADLI TVKGLRRLQS ADVVVFDALV LPELLAEARS DAELIPAGKR
GGQHSVSQDW INATLIEHAQ QGKLVVRLKG GDPFVFGRGG EEAAALSAAG IAWEVVPGIS
SAIAAPAYAG IPVTHRDVAS SVVFVTGHED PTKPTSRINW QALAQGVDTL VFLMGITRIN
HTVASLIANG RPADTPTAVI RWGTTADQKT VVAPLDQIEA AVKAAGIGAP AILIVGEVVA
LREQLNWFES TVLEMPEVVR AFA
|
|---|
| |