Gene Haur_1711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1711 
Symbol 
ID5733598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1990535 
End bp1992040 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content54% 
IMG OID641278853 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001544482 
Protein GI159898235 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID[TIGR02733] C-3',4' desaturase CrtD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000831031 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTATG ATCTGATTGT AATTGGTGCA GGCATTGCGG GCTTGTCTGC TGCCGCCCTC 
TTGGCCAAGG ATGGCTACCG AGTTTTAGTG CTAGAGGCGC ATATCGAGCC TGGTGGCTGT
GCTTCTTCCT ATCAACGCAA ACGCCCCAAT GGCGAACACT ATATTTTTGA TGTTGGCGCA
ACTGTCTTTG CGGGCTTTCG GCCTGGCGGT GCGCATTATT GGCTTGGGCA AAAATTAGGC
TTAACTTGGC CAATTCGCCC GGTCAATCCA GCGATGCAAG TTTGGTTGCC CGATCTGCGG
GTGACCCGTT GGGGTGATGA GCGCTGGATC GCCGAACGTC AGCGGTTGTG CCTAAGCCAA
GCATGGGAAG CTGAGCAATT TTGGCGTGAG CAAGAGCATT TGGCCGAGGT CGCTTGGCGC
TTTGCTGGTC GGATGCCGGC GATGCCGCCC GAATCATTGG CCGATCTTGG TCAGTTGATA
ACCCGAATTC GGCCTGAGAT GCTTGGTTTA TTGCCAGCCT TGCCGCGCAC GGTCAAGCAT
GCGCTCAATC GACATAAGGT GGATGATCGA CGAATTCGCA CCTTTATTGA TGGTCAATTG
TTGATTAGCG CCCAAAGTAG CCATGCCGAA TGTGCTTGGC TCTACGGAGC AGTGGCGCTC
GATTTGGCGC GAATTGGTAC CTATTATGTT GAGGGTGGCG CATGGAATTT GGCCAAAACC
CTCGAACAAG CCTTACTCAA GGCTGGCGGC GAAATTCGCT ATCGCCAAAA AGTAAGCCAA
ATTCAGACCG ATCTGGGGCA AGTGGTTGGG GTAACCACTG AGCAGGGCGA GCGTTTTCGC
ACAAAGCAGG TTATTGCTAA CACGACGGTT TGGGATTTAG CTGAGCTAAT CGATCAGCCG
CCAAGTTGGA TGCTCCGCCG AACGATCAAG GCTGTACCAC AAGGTTGGGG TGCGGCAACG
CTCTATCTGG GCATCGACGA AGCCGCAATT CCCCAAGGCT TAGCTGAGCA TCATCAAATT
ATTGCCAACT ATGATCAAGC GCTTGGCGAG GCCAATAGTG TGTTTATTTC ATTGCATCCG
GCTGATGATG CTTCGCGTGC GCCAGCTGGC CAACGAGCAA TGACCGTTTC GACCCATACC
GATGTTGGGC GCTGGTGGCA TTGGCGGCAA ACTGACCCAG CTCGCTATCG GGCTGAAAAA
ATAGCGATGG CTGAGCGCAT GCTCGATACT GTGGCGTTAG CAATGCCATC CATTCGCCAA
CATATTCGTT ATCAACAAAT TGGTACGCCC GTTTCGTTTG CCCGCTATAC TCAGCGCAAA
CGTGGTATGG TTGGCGGCTT GCCACAATGG CGTTCGGTTT CGGGCTTGCT TAGTTTGGGG
CCACAAGCGG CACGCATTAA CGGCTTGTGG TTGGTCGGCG ATAGCACGTT TCCTGGGCAA
AGCACCGCTG CCGTGACCCA AAGCGCGATT CAAGTTTATC AGAAAATTCG CCGTGCAGAT
CGTTAA
 
Protein sequence
MDYDLIVIGA GIAGLSAAAL LAKDGYRVLV LEAHIEPGGC ASSYQRKRPN GEHYIFDVGA 
TVFAGFRPGG AHYWLGQKLG LTWPIRPVNP AMQVWLPDLR VTRWGDERWI AERQRLCLSQ
AWEAEQFWRE QEHLAEVAWR FAGRMPAMPP ESLADLGQLI TRIRPEMLGL LPALPRTVKH
ALNRHKVDDR RIRTFIDGQL LISAQSSHAE CAWLYGAVAL DLARIGTYYV EGGAWNLAKT
LEQALLKAGG EIRYRQKVSQ IQTDLGQVVG VTTEQGERFR TKQVIANTTV WDLAELIDQP
PSWMLRRTIK AVPQGWGAAT LYLGIDEAAI PQGLAEHHQI IANYDQALGE ANSVFISLHP
ADDASRAPAG QRAMTVSTHT DVGRWWHWRQ TDPARYRAEK IAMAERMLDT VALAMPSIRQ
HIRYQQIGTP VSFARYTQRK RGMVGGLPQW RSVSGLLSLG PQAARINGLW LVGDSTFPGQ
STAAVTQSAI QVYQKIRRAD R