Gene Haur_1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1680 
Symbol 
ID5733564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1953565 
End bp1955271 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content40% 
IMG OID641278819 
ProductNERD domain-containing protein 
Protein accessionYP_001544451 
Protein GI159898204 
COG category[R] General function prediction only 
COG ID[COG3972] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAA TGTATCCTCC AAGCCTTGGT TCAAATAATG AAATCCCTTC ATCAGAGCGC 
CTTTTATACG AAATCTTCCA GAGTCAACTT GATGCTGATT TTATTGTATT TCACAGTGTT
GCTTGGCTTG GACGTGGGGC ACGCGGCCAG TTAAGCGATG GGGAAGCCGA TTTCATTATT
GTGCATAAAG CGTATGGCAT TTTAGTCATT GAAGCCAAAG GCGGTCGAAT TCGCTATAAT
GCCAACCTAC CAACCGATCA ACAATGGCAA ACGATTGATC GGTTTGAACA AAAGCATCAA
CTAAAATGTA GCCCTTTTGA GCAGGCCAAA CGAAGCAAAC ATGCACTATG GAATAAATTA
AAAGAATTAC CTCGGTTCAA GCAACCTAAG CTGTTGTTTG GCCATGCAGT TGCCTTTCCT
GATATTACAG CCGACTTCGA AATCTTACCA CCAGATACTA ACCAATCAAC AATTATTGAT
AGCCGTCATC TTACCGCTAT CCAACCTAAA ATTATCAAGA TCTACCAACA ATGGCAGGGA
AACCAGCGTT TTGAATCCTT AACTCCTGCA ACAGTGGATT TAATTATTCA GTTGTTGGCT
CCAGTCATTA GCATTGATAT TAGTTTAGGT TCGCGAATCA ATCAGTATCA AGCCCAATTA
TTAACGCTTA CTCAACAACA ATTTCAAACC TTAAATATGT TACGTCGCCA ACGCCAAGCG
CTCATTACTG GCTGTGCAGG GAGTGGCAAA ACGATGCTTG CGCTCGAAAA AGCTAAACGC
TTAGCGACGA ACGAAGCAAT GAATGTTTTA CTGCTTTGTT TTAATCGTCG ATTGGCGAAT
CATCTTAAAA CTCTCAGTAG TGGGATTCAA AATTTACAAG TTTATACATT TCATGAGTTT
TGCAGTACTA TTTGTTCTCA ATATCATATC AATAGTAGCA AACCAGCCAA TATCGATGAA
AAAACTTATT ATCGCTATTT TTTACCTGAA CAGGCCTTTT TGGCGAGCGA TGATCTTAGT
GAAGAAACAA AATTTGATGC ATTAATTATC GATGAAGGTC AAGATTTTGC TGAAAATTGG
TGGGATATTC TCACTATTTT CATAAAGCCA AATCCTATTT TCTATATTTT TTATGATAAC
AATCAACGAG TTTATCAAGA AAGTAACACA TTTCCAATCA ATCAAGACCC ATTTTATCTT
GATATTAACT GTCGTAATAC TCAAAAAATC CATCGAGCAG TTCGTTATTT TTATCAGGGT
AGCGATGCGG AAACCATCTC TGCCCAAGGC CCAGAAGGAG AAACAATTGA GGTACTATTG
TATGAAACAC CACAACAAGA ACGAGAACTC TTGGGCGAAA TACTCGGTCG GCTACACAAT
CAAGAACAAA TTTCAGCGAA GCAAATCGTT ATTCTCACAC CATATAGCCC ACAAAATCTC
AATTTAGCCA ATACAACAAT TGCTGGGTAT ATTATTAGCG ACAAGCCGCG CAACCCCCAA
CAAATACTGT GTTCTAGCAT TCAAGGCTAT AAAGGGCTTG AGGCTCCGGT CGTTATCTTA
GCGGGATTGG ATGAGCGGAT TGATGCTGGT GAGGTTGAGC AGCTCCAAAC CATTTTGTAT
ATTGCCTGCT CACGGGCAAG CGGTCATTTG ATTGTTTTGT TGCCGAAATC GGCCCCAGCT
AAAATTCGGA AAGCTTTTAC TGGATAA
 
Protein sequence
MAKMYPPSLG SNNEIPSSER LLYEIFQSQL DADFIVFHSV AWLGRGARGQ LSDGEADFII 
VHKAYGILVI EAKGGRIRYN ANLPTDQQWQ TIDRFEQKHQ LKCSPFEQAK RSKHALWNKL
KELPRFKQPK LLFGHAVAFP DITADFEILP PDTNQSTIID SRHLTAIQPK IIKIYQQWQG
NQRFESLTPA TVDLIIQLLA PVISIDISLG SRINQYQAQL LTLTQQQFQT LNMLRRQRQA
LITGCAGSGK TMLALEKAKR LATNEAMNVL LLCFNRRLAN HLKTLSSGIQ NLQVYTFHEF
CSTICSQYHI NSSKPANIDE KTYYRYFLPE QAFLASDDLS EETKFDALII DEGQDFAENW
WDILTIFIKP NPIFYIFYDN NQRVYQESNT FPINQDPFYL DINCRNTQKI HRAVRYFYQG
SDAETISAQG PEGETIEVLL YETPQQEREL LGEILGRLHN QEQISAKQIV ILTPYSPQNL
NLANTTIAGY IISDKPRNPQ QILCSSIQGY KGLEAPVVIL AGLDERIDAG EVEQLQTILY
IACSRASGHL IVLLPKSAPA KIRKAFTG