Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1680 |
Symbol | |
ID | 5733564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 1953565 |
End bp | 1955271 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641278819 |
Product | NERD domain-containing protein |
Protein accession | YP_001544451 |
Protein GI | 159898204 |
COG category | [R] General function prediction only |
COG ID | [COG3972] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAA TGTATCCTCC AAGCCTTGGT TCAAATAATG AAATCCCTTC ATCAGAGCGC CTTTTATACG AAATCTTCCA GAGTCAACTT GATGCTGATT TTATTGTATT TCACAGTGTT GCTTGGCTTG GACGTGGGGC ACGCGGCCAG TTAAGCGATG GGGAAGCCGA TTTCATTATT GTGCATAAAG CGTATGGCAT TTTAGTCATT GAAGCCAAAG GCGGTCGAAT TCGCTATAAT GCCAACCTAC CAACCGATCA ACAATGGCAA ACGATTGATC GGTTTGAACA AAAGCATCAA CTAAAATGTA GCCCTTTTGA GCAGGCCAAA CGAAGCAAAC ATGCACTATG GAATAAATTA AAAGAATTAC CTCGGTTCAA GCAACCTAAG CTGTTGTTTG GCCATGCAGT TGCCTTTCCT GATATTACAG CCGACTTCGA AATCTTACCA CCAGATACTA ACCAATCAAC AATTATTGAT AGCCGTCATC TTACCGCTAT CCAACCTAAA ATTATCAAGA TCTACCAACA ATGGCAGGGA AACCAGCGTT TTGAATCCTT AACTCCTGCA ACAGTGGATT TAATTATTCA GTTGTTGGCT CCAGTCATTA GCATTGATAT TAGTTTAGGT TCGCGAATCA ATCAGTATCA AGCCCAATTA TTAACGCTTA CTCAACAACA ATTTCAAACC TTAAATATGT TACGTCGCCA ACGCCAAGCG CTCATTACTG GCTGTGCAGG GAGTGGCAAA ACGATGCTTG CGCTCGAAAA AGCTAAACGC TTAGCGACGA ACGAAGCAAT GAATGTTTTA CTGCTTTGTT TTAATCGTCG ATTGGCGAAT CATCTTAAAA CTCTCAGTAG TGGGATTCAA AATTTACAAG TTTATACATT TCATGAGTTT TGCAGTACTA TTTGTTCTCA ATATCATATC AATAGTAGCA AACCAGCCAA TATCGATGAA AAAACTTATT ATCGCTATTT TTTACCTGAA CAGGCCTTTT TGGCGAGCGA TGATCTTAGT GAAGAAACAA AATTTGATGC ATTAATTATC GATGAAGGTC AAGATTTTGC TGAAAATTGG TGGGATATTC TCACTATTTT CATAAAGCCA AATCCTATTT TCTATATTTT TTATGATAAC AATCAACGAG TTTATCAAGA AAGTAACACA TTTCCAATCA ATCAAGACCC ATTTTATCTT GATATTAACT GTCGTAATAC TCAAAAAATC CATCGAGCAG TTCGTTATTT TTATCAGGGT AGCGATGCGG AAACCATCTC TGCCCAAGGC CCAGAAGGAG AAACAATTGA GGTACTATTG TATGAAACAC CACAACAAGA ACGAGAACTC TTGGGCGAAA TACTCGGTCG GCTACACAAT CAAGAACAAA TTTCAGCGAA GCAAATCGTT ATTCTCACAC CATATAGCCC ACAAAATCTC AATTTAGCCA ATACAACAAT TGCTGGGTAT ATTATTAGCG ACAAGCCGCG CAACCCCCAA CAAATACTGT GTTCTAGCAT TCAAGGCTAT AAAGGGCTTG AGGCTCCGGT CGTTATCTTA GCGGGATTGG ATGAGCGGAT TGATGCTGGT GAGGTTGAGC AGCTCCAAAC CATTTTGTAT ATTGCCTGCT CACGGGCAAG CGGTCATTTG ATTGTTTTGT TGCCGAAATC GGCCCCAGCT AAAATTCGGA AAGCTTTTAC TGGATAA
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Protein sequence | MAKMYPPSLG SNNEIPSSER LLYEIFQSQL DADFIVFHSV AWLGRGARGQ LSDGEADFII VHKAYGILVI EAKGGRIRYN ANLPTDQQWQ TIDRFEQKHQ LKCSPFEQAK RSKHALWNKL KELPRFKQPK LLFGHAVAFP DITADFEILP PDTNQSTIID SRHLTAIQPK IIKIYQQWQG NQRFESLTPA TVDLIIQLLA PVISIDISLG SRINQYQAQL LTLTQQQFQT LNMLRRQRQA LITGCAGSGK TMLALEKAKR LATNEAMNVL LLCFNRRLAN HLKTLSSGIQ NLQVYTFHEF CSTICSQYHI NSSKPANIDE KTYYRYFLPE QAFLASDDLS EETKFDALII DEGQDFAENW WDILTIFIKP NPIFYIFYDN NQRVYQESNT FPINQDPFYL DINCRNTQKI HRAVRYFYQG SDAETISAQG PEGETIEVLL YETPQQEREL LGEILGRLHN QEQISAKQIV ILTPYSPQNL NLANTTIAGY IISDKPRNPQ QILCSSIQGY KGLEAPVVIL AGLDERIDAG EVEQLQTILY IACSRASGHL IVLLPKSAPA KIRKAFTG
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