Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1652 |
Symbol | |
ID | 5733536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1919606 |
End bp | 1920349 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641278791 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_001544423 |
Protein GI | 159898176 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0300286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTACAGC CGTTTGGCGC ACGCAAAGGG CCATTTGTAA TTGGGCATCG CGGAGCAGCA GGCTATGCTC CTGAAAATAC TATGGCGGCT TTTCAACGTG GCTTGGCTTT ACGCGCCGAT GCCGTGGAAT TAGATGTTAA TTTGAGCAAA GATGGTGAGT TGATGGTGAT CCATGATCCA ACGCTCAATC GCACTACCAA CGGCTCGGGC TTAGTTTGTC ACCACACTGC TGCCGAAATT CAGGCGCTTG ATGCTGGCTC ATGGTTCGAT CCTTCGTTCA GCGATTGCCG CGTGCCAACT TTGCGCGAGG TTTTGCAATG GGCCAAGGAT CGCACTAAAG TGGTGATTGA ACTAAAAAAT GGCCCGATTT TCTACCCCGA TATTGAAGTG GCCTTGGTGC GTTTGCTCGA TGAATTGAAT GTGCGTGATC AAGTCATGGC GATTTCGTTT GATCATGTGG TGTTGGGCCA ACTCAAGGCG ATCGCTCCCG ATGTAGCAAC TGGGGTGATT TATGCCTCGC GCGTGCCCGA TGCGCCGGCT ATGGCTAAAT TGGTGAATGC TGATTTGGTG ATGCCTTATT GGGCAATGTT GACCCGCGAG GAAGTCGAAG CTTGCCATGC TGCTGATTTG TTTGTTAGCC CATGGGGTGG CCCCGAACAA GATTATCAAC ATATTTTGAG TTTGGGGGTT GATGCGGTTG GCGCTGATTA TCCCGACCGT CCACGCCAAT TTATGGCTGA TTAA
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Protein sequence | MLQPFGARKG PFVIGHRGAA GYAPENTMAA FQRGLALRAD AVELDVNLSK DGELMVIHDP TLNRTTNGSG LVCHHTAAEI QALDAGSWFD PSFSDCRVPT LREVLQWAKD RTKVVIELKN GPIFYPDIEV ALVRLLDELN VRDQVMAISF DHVVLGQLKA IAPDVATGVI YASRVPDAPA MAKLVNADLV MPYWAMLTRE EVEACHAADL FVSPWGGPEQ DYQHILSLGV DAVGADYPDR PRQFMAD
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