Gene Haur_1614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1614 
Symbol 
ID5733516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1874552 
End bp1875721 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content51% 
IMG OID641278753 
ProductTPR repeat-containing protein 
Protein accessionYP_001544385 
Protein GI159898138 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCAA CTGTTCAACA ATTAATTCAA CAAGGCGTGC AGGCGGCTCG TGCTGGCAAC 
CATGCCGAGG CACGACTGGT GCTGCGTCAG GCCATTACTG CTGACCCTCA AAATGAGCAA
GCGTGGCTCT GGCTGAGCGC GGTTGAAGCC ACCAATGGCG AGAAAATTGC CGCCTTACAG
CAAGTTTTAG CAATTAATCC AGCCAATGCT GCTGCCAAAC GCGGGCTTGA TCTGCTTAAG
CCAACTCAGA TAGACTTTGC GAATTTGGGT CAGACGAGTA CGGCGGCTCC GGCTAAAGCT
AGTTTTTCGC CGCCGCCAGC CCGCGCAGCA GGCAATGCTA GTTTGTTGCA ACCACGCCCA
AATTTTGAAG TAAACTCACC TGCTTCGCCG ATCAGCCAAG AATTTGGCAC GCTGGCTAGT
GCAACCCCTG CGCCGATCCC TGCCCAAACG CTCGAAACTC CAGCAGTGCA GGCAACAGTT
GCCGAAACCA AGCCAACGCC TGAGCCAACA AACGCCGTTA ACTATAATAA TGATCTGGTT
GGTTCGTTGC GGCCAGCCAT TGCTAAAGGC CCCAAAAAGC GCTCAGTGTT GCCCACCAGA
AGCGAATTGA TAATTTCTGC TATTCTTTTA GTATTGCTGA TCGGTGGGTT TAATCTGGTG
CGTTCGGCTT TAGCTGGGCG GCTTGGTGGC TTGCGTGGTA GCGATGAAAT TAGTGCTAGC
GAGCGAGCAA CGAGTCAGGC CTTAATTGGT TGGAATGCCA ATGTGCCCAC GCCAGTGGTT
GAAGTAATTA CTGATTCTGG CCAAGCGCCG CAGCCGCAAC CAACCCAGCC TGTGGCAAGT
GGTAGCATTC ATGAATCGCG TAGCTATTTC TTGACGATCG GTGAAACGGT GATTGCCAGT
GATGGTAAGC AGGTGACGAT CAATCTCGTA TTGCAAAATC CTTCCAATCA ACCGTTAACC
TTTCGGGCTG CCGATTTTAC AATTCAGACT AACCTTGGAT CGTTTCCGAT TGCTTCAAAT
TCGCCTTTGA TGAATACCCT GACAATTCCG GCGAATGCTA GCCACGCGGG CACGGTGCTT
GCACGAACCA ATACTGGTGA GTTTCAGTCG ATCAAGTTGG TCTGGCGACC AACCAGCGGC
GGGATTTCTA AAACAATTAC ATTACGCTAA
 
Protein sequence
MSSTVQQLIQ QGVQAARAGN HAEARLVLRQ AITADPQNEQ AWLWLSAVEA TNGEKIAALQ 
QVLAINPANA AAKRGLDLLK PTQIDFANLG QTSTAAPAKA SFSPPPARAA GNASLLQPRP
NFEVNSPASP ISQEFGTLAS ATPAPIPAQT LETPAVQATV AETKPTPEPT NAVNYNNDLV
GSLRPAIAKG PKKRSVLPTR SELIISAILL VLLIGGFNLV RSALAGRLGG LRGSDEISAS
ERATSQALIG WNANVPTPVV EVITDSGQAP QPQPTQPVAS GSIHESRSYF LTIGETVIAS
DGKQVTINLV LQNPSNQPLT FRAADFTIQT NLGSFPIASN SPLMNTLTIP ANASHAGTVL
ARTNTGEFQS IKLVWRPTSG GISKTITLR