Gene Haur_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1606 
Symbol 
ID5733508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1864545 
End bp1865585 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content50% 
IMG OID641278745 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001544377 
Protein GI159898130 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGGGT ATATTTTTCG TCGGCTGCTT GGCATTATTC CCGTCCTGCT TGGCATTTCG 
CTCCTGGTTT TTACCCTGCT CCGAACCATC CCCGGTGATC CGGCGATTAT CATTCTCGGT
GAACGCTCAA CCCCCGAACA ACGCGCCGCC CTGCGCACCA AACTCAAACT TGATCGCCCC
TTGTTTCTCA ATTTTGAGGG CGGCAATATC TTCGAAAGCC AATATGTGAC CTATATCACC
AATTTTGCTA CTGGCGATTT TGGTGATTCG ATCAAAACCC GCCAAGCGAT TTCCAAAGAA
TTAAAGCAGC GTTTCCCTGC GACGATCGAG TTAGCACTCA GTGCTTTGTT GATTGCAGTG
GTGGTTGGCG TGACCACAGG TGTGGTCTCG GCTACCAAAC GTGGCTCTTG GCTCGATGCC
AGCAGTATGA TTGTAGCCTT GCTCGGTGTT TCAATCCCGA TCTTCTGGTT GGGTTTGATG
ATGCAATACC TCTTTTCAGT CAAACTCAAA TGGCTTGACC CAAGTTTGCG GCTTGATACT
AGCTTGCAAG GCTCGTTCGA GCCAATTACG GGCCTGTATT TGCTTGATGG CCTGTTGCTT
GGGCGATTTG ACATTACCAT GAACGCCTTT AAACATTTAA TTATGCCCAG CCTGGCTTTG
GCGACTGTAC CGCTTGCTAG CATCGCCCGC ATGACGCGTT CGGCCATGCT CGAAGTGCTG
TATCAAGATT ACATTCGCAC TGCTCGTGCC AAAGGCTTAT CGGCGCGGAT TACGATTTTG
CGCCACGGCT TGCGCAATGC CTTAATTCCA GTGATTACGG TAATCGGGCT GCAATTGGGC
TTTTTGCTGG GCGGCGCTGT GTTGACGGAA ACGGTATTTT CATGGCCAGG AATTGGGCGC
TGGCTGCTTG ATGGCATTTT AGCCCGCGAT TATCCGGTGG TGCAAAGCGG CGTGATGTTT
GTCTCATTGG TATTTGTGTT GATCAATACC TTGGTCGATA TTTCCTACCG CTTCTTTGAT
CCCCGAATTC AATATAAGTA A
 
Protein sequence
MVGYIFRRLL GIIPVLLGIS LLVFTLLRTI PGDPAIIILG ERSTPEQRAA LRTKLKLDRP 
LFLNFEGGNI FESQYVTYIT NFATGDFGDS IKTRQAISKE LKQRFPATIE LALSALLIAV
VVGVTTGVVS ATKRGSWLDA SSMIVALLGV SIPIFWLGLM MQYLFSVKLK WLDPSLRLDT
SLQGSFEPIT GLYLLDGLLL GRFDITMNAF KHLIMPSLAL ATVPLASIAR MTRSAMLEVL
YQDYIRTARA KGLSARITIL RHGLRNALIP VITVIGLQLG FLLGGAVLTE TVFSWPGIGR
WLLDGILARD YPVVQSGVMF VSLVFVLINT LVDISYRFFD PRIQYK