Gene Haur_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1600 
Symbol 
ID5733487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1855953 
End bp1856576 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content53% 
IMG OID641278739 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001544371 
Protein GI159898124 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGTG TTTTAGTCGT TGATGATCAT CCAGTTGTGC GCCACGGCTT GATGGCGATG 
CTCGGCTGGG AGCAGGATTT CGAGCCAGTT GGTGATGCTG CTGATGGTCA ACAAGCAGTT
AACTTGATCG AGCAACAACA ACCTGATGTG GTGTTACTTG ATTTGCGTTT GCCGCAACTG
AGTGGCATCG AAGTGATGCG CCATACCCGT GCCAGCGCCC CCAATACCCG TTTTCTGGTG
CTCACAACCT ATGATACCGA CGAATACATT GGGCCAGCCT TGAACGCTGG AGCCGCTGGA
TATTTACTCA AAGATGCGAG TCCTGAGGAA GTTTTTCGGG CGATTCGCTC AATTTATGAG
GGTGGTGCCG CCTTGCAATC GGGTATTGCG GCGCGAGTGC TCAAACGACT AGCCACCGAG
CCAGCCGAAG ATGAGCTTTC GCAGCGTGAG CTTGATGTGT TGCAATTACT GGTACGGGGC
GAAAGCAACA AAGCCATTGC CCTCAGCCTC AACATCTCCG AAAACACGAT CAAATCGCAT
GTCAGCCATA TTTTTAGTAA GCTCGATGTG CGCAGCAGGG CTGAGGCCGT GGCGGTTGCC
TTGCAACGAG GCCTTGTAAA GTAG
 
Protein sequence
MIRVLVVDDH PVVRHGLMAM LGWEQDFEPV GDAADGQQAV NLIEQQQPDV VLLDLRLPQL 
SGIEVMRHTR ASAPNTRFLV LTTYDTDEYI GPALNAGAAG YLLKDASPEE VFRAIRSIYE
GGAALQSGIA ARVLKRLATE PAEDELSQRE LDVLQLLVRG ESNKAIALSL NISENTIKSH
VSHIFSKLDV RSRAEAVAVA LQRGLVK