Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1595 |
Symbol | |
ID | 5733482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1848424 |
End bp | 1849956 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641278734 |
Product | polysaccharide deacetylase |
Protein accession | YP_001544366 |
Protein GI | 159898119 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0639378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTTTTG TGCCGTTGTT GCTGCCTCAA AGCACAGCGG CACGGATTAT TTTAGCCGAA GATCGGGCCT TTGATCAGCT TTGGCAAAAT ACCGATGGTC AGCGTGGCGA TGAGCAATCG TGGCTGTGGG GGCCGCAGCG TTTGTGGCAA ACCCAAGAGC GCTATGCGGA AAGCCCGCGT GAATTGCGTT GGGTGCGCTA CTATGCCAAA GCTCGCATGG AAATTAGTGA TCCCAAGCTT TCAGCCAAAT CGCCGTGGTA CATTACCAAT GGTTTGTTGG TGGTTGAGTT GGTGACTGGT CGCTTGCAAA TTGGCAATGC GGCTTGGCGT GAGCAATGCA CAGATGGCAT TTGCGGCTCG GAGCAAGCAG TGGCAGGCGA TGCAGTGGCG GCTAATCGTG CGCCACGCTA CCGCGATTGG GCTGAATTTT TGACCTTGAA TGGCCAAACT GGAGCCGATT TGCGTGGTCA GCCCGTAACC AATTGGCTAA CTCACGAAGC TGAAGGCCTG CAAGTTTGGT CTGATCCAAG TTTGGCTGAG CGCTACCCCG AAACCAGTGG CAATCATCGC GATGAAGTGA CTGGTCAAAC TGTGCCAGCC GTGTTGTGGG AGTATGTGCA AGCCCAAGCC CGCGAAGCGT TATATGTCTT TGGGCGGCCT ATCAGCCCAG CGTTTTGGAC CCAAACCTTG GTTGATGGGA TTGAGCGCGA AGTGCTGGTG CAATTGTTTG AGCGTCGCAC CTTGACCTAC ACGCCGAGTA ATCCGCTTGG CTGGCAAGTT GAGATGGGTA ATGTTGGCCA ACATGCCTTG GAATGGCGCT ATGACTTGCG ACCATGGGAT TATCAACCAT TGCATGTGAC CATGTTGACC TACCACTACA TTTCGGCAAA TCCCAATCCG GCTGATCGCT TGCGCGAAAG TTTATCGGTA GCACCAGCCG AATTTAAACG CCAGCTCGAA TATCTACAAA ACCATAATTT TCATGTGGTA AGTTTGGATC AGGTGTTGGC GGCGCAACGC GGTGAGTTGA GTTTGCCCGA ACATCCAGTT GTCATAACGC TTGATGATGG CTATCGCGAT TTGTACGAGC AGGCTTTTCC GATTGCCCAA AGCCTGAATC TACCGATCAC TGCTTATATT CCGTCGGCCT TGGTGGGTGA GCCAGCCTAT GTTAGTTGGC AGCAATTGCA AGAGCTAAGC CAATCGCCGT TAGTCACAAT TGGCTCGCAT ACCCGCATAC ACGCCGATTT GGGCACGCTT GATCGTGAGT CGCAGTGGAT TGAAATTGCT GATAGTAAAC GTGAGTTGGA AGCACATTTG GGGATTGCGA TTGAGCATTT TTGCTACCCC TATGGCCGCT ACAATGCCCT GACCATGGAG CTAGTGCGCG AGGCGGGCTA TCGTAGTGCT ACGACTACCC GCCAAACTAC CGATACTGCC AACGATGATC CCTTGATTTG GAATCGGATC ACGATTTCTG GCCGCGATTC GTTTGAGGAT TTTGTGGCCA AACTCGAACG CAGCCAAGAT TAA
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Protein sequence | MVFVPLLLPQ STAARIILAE DRAFDQLWQN TDGQRGDEQS WLWGPQRLWQ TQERYAESPR ELRWVRYYAK ARMEISDPKL SAKSPWYITN GLLVVELVTG RLQIGNAAWR EQCTDGICGS EQAVAGDAVA ANRAPRYRDW AEFLTLNGQT GADLRGQPVT NWLTHEAEGL QVWSDPSLAE RYPETSGNHR DEVTGQTVPA VLWEYVQAQA REALYVFGRP ISPAFWTQTL VDGIEREVLV QLFERRTLTY TPSNPLGWQV EMGNVGQHAL EWRYDLRPWD YQPLHVTMLT YHYISANPNP ADRLRESLSV APAEFKRQLE YLQNHNFHVV SLDQVLAAQR GELSLPEHPV VITLDDGYRD LYEQAFPIAQ SLNLPITAYI PSALVGEPAY VSWQQLQELS QSPLVTIGSH TRIHADLGTL DRESQWIEIA DSKRELEAHL GIAIEHFCYP YGRYNALTME LVREAGYRSA TTTRQTTDTA NDDPLIWNRI TISGRDSFED FVAKLERSQD
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