Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1578 |
Symbol | |
ID | 5733465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1834899 |
End bp | 1835723 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641278717 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001544349 |
Protein GI | 159898102 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000362296 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCAAG ATTATGGCCG CATGGCCTAT GTTGCTGAAT ATCCTCAAAC CACAGTGCGC CGCAAGCAAC GCCGTGCTTG GTTGGGTTCG AGTCGGTTGT GGGTTGGGCT TTCGTTGCTG GGCTTGCTGT TGGCATGGCG CGGTTTAGTC GCTTGGCAAC AATACCCAGC TTTTGTTTTG CCAACGCCTG AAGCGGTTGC TAGCCGCTGG TGGCAGGAAT TAACCCAAGG TGCGTTGCTG CAACACACCT CTCGCACCTT AATCGAAGCG CTGGGCGGTT TTGGCTTGGC CTTCAGTGCA AGTTTGGTTT TGGGCTATAT CTTGGCCCAT TGGCATTGGC TCGATCGAAT TGTCTCGCCG CAACTGGCGA TTGTGCAGGC GATTCCAATC GTCGCGGTTG CACCGTTGAT TCTGATTTGG GTCGGCGCTG ATTTGCGGGC TAAATTGTTG GTTGCCGCCT TGGTTACCTT CTTTCCGATG CTCAGCAGTG TGATTGTGGC TTTGCGCAGC GTGCCCCGCG ATATTCGCGA AATGGCGGCG ATCAGTGGAG CCAATCGCTG GCAAAGTTTG TGGCAGATTG AATTGCCTTT GGCCTTACCG GGGATTTTCG GCGGGATCAA AACAGGCCTT GCCTTGGCTA CGACTGGCGC GGTTGTCGCT GAGTTTATTG GTGGTCGCGA AGGGCTGGGA GCGTTGATTA ATATTGCTCG TGGTTTATTT GATACGCCGC TGATTTTTGC GGCTTTGTTG ACCCTCGGTT TGCTGACATT TGGGTTTTAT CAGCTAGCAA TGTGGCTAGA ACGACGTTTG GTCACTTGGG AATAA
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Protein sequence | MLQDYGRMAY VAEYPQTTVR RKQRRAWLGS SRLWVGLSLL GLLLAWRGLV AWQQYPAFVL PTPEAVASRW WQELTQGALL QHTSRTLIEA LGGFGLAFSA SLVLGYILAH WHWLDRIVSP QLAIVQAIPI VAVAPLILIW VGADLRAKLL VAALVTFFPM LSSVIVALRS VPRDIREMAA ISGANRWQSL WQIELPLALP GIFGGIKTGL ALATTGAVVA EFIGGREGLG ALINIARGLF DTPLIFAALL TLGLLTFGFY QLAMWLERRL VTWE
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