Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1467 |
Symbol | |
ID | 5733352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 1710323 |
End bp | 1712872 |
Gene Length | 2550 bp |
Protein Length | 849 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641278605 |
Product | hypothetical protein |
Protein accession | YP_001544239 |
Protein GI | 159897992 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTGC TCTATCGCAG TAGTTTGCGC TATTTACTCC GCCACCCCGC CCAGGTTTTG CTGGCAATTT TAGGCGTGGC CTTGGGCGTG GCGGTGGTGA TCGCGATTGA TTTAGCCAAT GGCAGTGCCC AACGGGCCTT TATGCTCTCC ACCGAGAGCG TCACTGGCAA AACCACCGAT CAAATTCTGG CGGGGCAAAA TGGCTTGTCC AGCGATTTAT ACGCTCAGTT GCGCACTGAA TTAGGCTTAT CAGCGGTCGC GCCAGTCGTT GATCGCACAA TCAGTCTGCC CAATCAGCCA GGCCGTTCAT TTCGTTTATT TGGCATCGAC CCATTTGCCG AACAGCCGTT TCGACCATAT TTGGCAACTC TCTTCAATAA CCAAACCGAT CTGCAAGCGC TATTGACTGA GCCAAATACT GGCTTGATTT CGGCGCAAAC TGCCCAAACT CTTGCTTTGA CCGTCGGCCA AACCCTTGAA ACGCGGATCG ACGGCCAGCG CCGCAACATT ACGATTATTG GGTTGATCGC TGGAGGCGAT CAATTAAGTC AAGAAGCTTT GGCCGATTTG ATTTTAGTTG ATATTGCGAC CGCGCAGGAG TTAGTTGGTC AACCAGATCG GATTAGTCGC ATCGATTTGA TTTTGCCTGA GGAGCAACGC AGCGCAATCC TTGAGCAAAT CAAGCCGTTG TTGCCTGCTG ATGCGACCCT GACGACCCCC GCCGCCCGCA GCGAAACCCT GCAACAGATG ACCCGCGCCT TTGAACTCAA TTTACAAGCA CTCAGTTTAT TGGCCTTGAT CGTCGGGGTT TTCCTGATTT ACAACACCAT GACTTTTTCG GTGGTGCAGC GGCGTGGTTT GTTTGGCATT TTGCGCTCGT TGGGCGTGAC ACGGCGCGAA CTATTCAGCC AAATTCTGAT CGAGGCCGCC GTGATTGGCA CCATCGGGGC AATCCTCGGG GTGCTATTGG GCATCGTGCT TGGCCGTGGT TTGGTGCGAC TGGTCACCCA AACGATCAAC GACCTCTATT TCAGCGTCAA TGTACAAAAC ATTGCGATTG ACAACATCCA ATTAATTAAA GGTTTTGGGC TGGGCTTGGG CGCAACCTTG ATTGCCGCCA GCATTCCAGC ACTTGAAGCT ATGTTCTCAC CGCCACGCAC GGTGCTACGA CGTTCCTCAA TCGAAGAACG AATTCAACGG ATTGTGCCAC GCTTGACCTT GGCAGGCTTG GGTTTAGCAG GTTTGGGCGT GGCTTTGCTG CAAATTCCAT CGCGCAGCTT GTTCCTCAGT TTTTCAGCCA TGTTTGGGGT GATCATTGGC TGTGCCTTGT TCACGCCATT TGTCACCTTG CAGATGATGC GATTGTTGCA AATTCCACTC AACCGCATGT TTGGGCTGCT TGGTAAGATG GCCGCTCGTG ATGTGGTTGC CGCCTTGAGC CGCACTGGCG TAGCAATTGC TGCCTTGATG GTGGCGGTTT CGGTCACGGT TGGCGCTGGC ACGATGATTG GCTCGTTTCG CACAACGGTC GTTCGCTGGC TTGATCAATC GTTGCAGGCT GATGTGTTTG TGTCGGCTCC CAGTTTGAGC GCTAATCGTG CTGACACCGC GATTGATCTA CGCTTAGTCG AACAAATCGA TCAATTACCC AGTGTTGCCT CGATGACGAC CCTGCTGAAC TTACGGGTCG AAAGTGAGCT TGGGCCAGTT CAATTAGCCG TCGCCAATTA TCAAGATTCA AGTTTGAGTC GGCGGGCATT GAGCTTTATC ACCGATGCTG AGCAGGCTTG GCAAGGCTTT GCCGAACAAG GCCAAGTTTG GGTTTCCGAG CCATTTAGCT ATCGTTATGG GCGAGGGCTT GGCGATAGTA TCACCTTACA AACCGAACGC GGCCCACAAC AATTTACGAT CGCCGGAGTG TACTACGATT ATGCCTCGGA TCAAGGCTAC ATCTCCATGA ATCGGCGTGA TTTTGCCAAA TATTGGGATG TTGATACGGT GCATTCGATC ACGATTTGGC TGGCTGAGAA CGCTGATAGT GCCACGACGA TCAGTCAAAT TCAGGCTTTA GCTGCACCAA TTCAAGATTT GAAGGTGCAA TCGAACCAAG CTTTGCGCCA AAGCACCTTG GAAATTTTCG ACCGCACCTT TGCAATCACG GCAGTTTTGC AGTTATTGGC CACAATTGTT GCCTTTATCG GCATTTTAAG CGCATTAATG GCCTTACAAT TAGAACGAAG CCGCGAACTT GGAGTTTTAC GCGCCAATGG CATGACCCCA CGCCAATTGT GGTTGAGCGT GCTCAGCCAA ACTGGTTTAA TGGGGCTAAC TGCTGGATTA TTGGCCTTGC CAGTCGGCTT GATTTTAGCG GTCGTACTAG TCTATGTGAT CAATAAACGA TCATTTGGCT GGACGATGCA GCTGATTCTC GACCCCAACT TATTGCTGCA AGCCTTGATT GTAGCAGTTG TGGCAGCGCT GTTGGCAGGC TTGTATCCAG CGTGGAAAAT GGGGCGTACC TCGCCAGCGT TGGCGTTGCG GGAAGAATAG
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Protein sequence | MKLLYRSSLR YLLRHPAQVL LAILGVALGV AVVIAIDLAN GSAQRAFMLS TESVTGKTTD QILAGQNGLS SDLYAQLRTE LGLSAVAPVV DRTISLPNQP GRSFRLFGID PFAEQPFRPY LATLFNNQTD LQALLTEPNT GLISAQTAQT LALTVGQTLE TRIDGQRRNI TIIGLIAGGD QLSQEALADL ILVDIATAQE LVGQPDRISR IDLILPEEQR SAILEQIKPL LPADATLTTP AARSETLQQM TRAFELNLQA LSLLALIVGV FLIYNTMTFS VVQRRGLFGI LRSLGVTRRE LFSQILIEAA VIGTIGAILG VLLGIVLGRG LVRLVTQTIN DLYFSVNVQN IAIDNIQLIK GFGLGLGATL IAASIPALEA MFSPPRTVLR RSSIEERIQR IVPRLTLAGL GLAGLGVALL QIPSRSLFLS FSAMFGVIIG CALFTPFVTL QMMRLLQIPL NRMFGLLGKM AARDVVAALS RTGVAIAALM VAVSVTVGAG TMIGSFRTTV VRWLDQSLQA DVFVSAPSLS ANRADTAIDL RLVEQIDQLP SVASMTTLLN LRVESELGPV QLAVANYQDS SLSRRALSFI TDAEQAWQGF AEQGQVWVSE PFSYRYGRGL GDSITLQTER GPQQFTIAGV YYDYASDQGY ISMNRRDFAK YWDVDTVHSI TIWLAENADS ATTISQIQAL AAPIQDLKVQ SNQALRQSTL EIFDRTFAIT AVLQLLATIV AFIGILSALM ALQLERSREL GVLRANGMTP RQLWLSVLSQ TGLMGLTAGL LALPVGLILA VVLVYVINKR SFGWTMQLIL DPNLLLQALI VAVVAALLAG LYPAWKMGRT SPALALREE
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