| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1464 |
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| Symbol | |
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| ID | 5733349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1706886 |
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| End bp | 1707974 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641278602 |
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| Product | nifR3 family TIM-barrel protein |
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| Protein accession | YP_001544236 |
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| Protein GI | 159897989 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00679382 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCTTA TGCCTGATAC TCTGACCCAA GCATTGCCCG AATCATTTCA ACTTGGCTCA
ATGCGCATTT TTCCAAACAT GGTGCTGGCC CCGATGGCTG GCGTAACCGA TTCAGTCTTT
CGGCGGCTGG TGTTGTCGTT GGGTGGCTGT GGCTTGGTTG TTTCTGAGAT GACCAATGCT
GCCAGTGTTT CGCCCAAGGC CATGAAACGC CATCGCTTGC TGGATTATCT GCCCGAAGAA
CGGCCAATTT CGATTCAACT TTCGGGCAAC GACCCCGATT TGGTGGCAAC CGCCGCCCGC
TTTGTTGAAG AACTTGGCCC CGATGTAATT GACATAAACT GTGGCTGCCC TTCGCCCAAA
GTCACTGGTG GCGGCCATGG TTCGGCCTTG CTCAAAGATT TGCCCAAAAT GCAGCAAATG
CTCAAAGCCG TGTATGCAGC GATCAACATT CCGTTTACGC TCAAATTTCG GGCTGGCTGG
GATGAGCAAT CGCTAAATTA TATTGATACC GCTAAAATTG CTGAAGATGC TGGTTGTGCC
GCGATTACCT TGCATCCACG TACCAAAGTG CAAGGCTACA GCGGCGATGC CGATTGGTCG
CGGGTTGCTG AAGTTGTGCA AGCAGTCTCG ATTCCGGTGA TTGGCTCAGG CGATGTGCGC
ACACCAGCCG ATGCTTTGGC GCGTTTGGAG CAAACTGGGG TTGCAGCAGT GATGATTGGT
CGAGCTGCCA TGGCCAATCC ATGGATTTTT CGCCAAATTG CTCAATTGCG GGCAGGCGAA
CCCATATTTG TGCCAACACC AAGCGATAAA CGTGATTTGC TGGTGCGCTA TGTTGATATG
TGTGCTGAAA CTATGGTTGA GCGCCAAGCC CTTGGCAAGC TAAAACAACT GATTGGTCAA
TTCAGCATTG GTTTGTATGC TAGCAACCAA TTGCGCCGCG ATGTACAACG TGCCAACGAA
ATTGAAGCCG CCAAAGCGAT TATTGCCAAC TTTTTTGAGC CATTTATCAG CGGCGCGGTC
GAGGCGGTCG AAGTGCCCGA CGAAATCGCC GTGATCAAAG AAGGTTGCGA GAACGGCGCG
AATAATTAG
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| Protein sequence | MQLMPDTLTQ ALPESFQLGS MRIFPNMVLA PMAGVTDSVF RRLVLSLGGC GLVVSEMTNA
ASVSPKAMKR HRLLDYLPEE RPISIQLSGN DPDLVATAAR FVEELGPDVI DINCGCPSPK
VTGGGHGSAL LKDLPKMQQM LKAVYAAINI PFTLKFRAGW DEQSLNYIDT AKIAEDAGCA
AITLHPRTKV QGYSGDADWS RVAEVVQAVS IPVIGSGDVR TPADALARLE QTGVAAVMIG
RAAMANPWIF RQIAQLRAGE PIFVPTPSDK RDLLVRYVDM CAETMVERQA LGKLKQLIGQ
FSIGLYASNQ LRRDVQRANE IEAAKAIIAN FFEPFISGAV EAVEVPDEIA VIKEGCENGA
NN
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