| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1428 |
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| Symbol | |
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| ID | 5733336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1649056 |
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| End bp | 1652475 |
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| Gene Length | 3420 bp |
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| Protein Length | 1139 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641278566 |
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| Product | Ricin B lectin |
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| Protein accession | YP_001544200 |
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| Protein GI | 159897953 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5498] Predicted glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.737248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAC AACATTTACC TAATCGCTCA AGACGATTAC CATGGCTTGC AGGAACCCTC
CTAACATTAT TAACTTCCAG TTTGTTCTTT TCTCCAACCC AACCTGTTGC CAACGCTGAT
CAAGCTGGGC TGGGCAGTTA TACTACCACC TTGCCAGCAG GCGCAAAAGT TCCCGATGAT
TTTAATGGAA ATCCTGTTTC TCCCAAACGC ACTGCCAATG TCACTGGCGC TATGCCCACC
AACGATTGGT GGAGTTCGCT CGGCTGGCAG CGCTTCCCTG GTAATCCCTA TTCGGAAAAT
ATGACGGCCT TGCCGTTGAT TGTCAAAGCC AAAGCGACTG GCTTGGGCGT GACCTTCCCA
ACAATTCCGG CAATTTCAAC TGGCTCGCCC AACTACATTG GTGAGTTTCA CTATAACGCT
TCCGAAGACC TGAACCTTGG TTTGGTGGGC TTGAATTCGC CCGATGCCAA AGTTGACGGC
TACTCGGATT GGACAGTCAC GGCCTATTGG AATGGTGGCG GCACGCTCCG CGCAACCTTT
GGCCATGGCA TGCCTTTCGT CTATTTGACC AAGAGTGGCG GCGATGCTTT GATTAGCGCG
GCGGCTCCGC CAAGCGTTTG GACTGGCGCT GGCACGAATG CCCTCGGCAT CACGGTCAAC
GGCCATCATT ACGGTATTTT TGCCCCAACT GGCACAACCT GGAGCCAATC GGGGAACAAT
TTCCAATCAA ATTTGGCTGG CAAAGATTAT TATTCGGTGG CAGTATTGCC TGATAATAGC
GTGGCAACCT TTAATTTCTT CAAATCCCGC GCCTATGCCT TTGTCACCAA CACCACCGCC
AGCTGGAGCT ACGACCAAGC TTCTGCTACC TTGAATACAA CCTTCAGCGC AACCACGGTT
GCCAAAGAAG GCAGCAATAC CAACACTGTT TTGGGCTTGT ATCGCCACCA CGCGATCAAC
TCATCGACGG CGTTGACCAA CTACAGCTAC ACCACCGCCC GTGGTCAAAT TCGCTTGCGC
GATGGTAATT CGTTTACCAC GGCCATGCGC TTCAATGGTG TGCTGCCAAC CCTGCCAGAT
GCTGGCGATT ACAACCGCAC CACCCTCAAC AATCACTTGA ATGATGTTGC CTTCGAAGCT
AGCCACTTTG GCGGTGCTGA TACCTACTAC ACTGGTAAGG CGCTCTTACG GTTGGCCAAC
TTGATTCCGA TTGCTGAACA ACTGGGCAAC ACCAACGCCC GCAATGCGTT GATTACCGCT
GTGCGCAATC GTTTGCAAGA ATGGTTCACC GCTAGTGCCA ACGATACCAA TGGCCAGTTC
TACTACAATA GCAATTGGGG TACGGTCATC GGCTATCCAG CCTCGTTCGG TTCGGATACC
GAATTGAACG ACCACCACTT CCACTATGGC TATTACATCT ACGCTGCGGC AATCTTGGCC
CAATATGATC CAAACTGGGC GCTCGATAGC AACTGGGGTT CGATGGTCAA GCTGTTGATC
AACGATGCTG CCAACATCAG CACCGCCACT GATCCCCGCT TCCCACGCTT GCGCACCTTC
GACATCTACG AAGGCCACTC ATGGGCTTCG GGTCACGCGG GCTTTGGCGC AGGCAACAAC
CACGAATCAT CATCAGAAGC AATGATGTTC AACAGCGCTG TGCTGTTGTG GGGTGCAAAC
ACTGGCAATA CCCAATTGCG CGACCTTGGG ATCTTCATGT ATACCCATGA AACCCACGCG
ATCGAGCAAT ATTGGTTCAA TGTTGATAAC GCTGTGTTTC CTGCTGGCTT CACCGCCAAC
AACAACCACC CCGCCGTCGG GATGGTTTGG GGCGATGGTG GTAGCTACGC AACTTGGTTC
AGCGCCAACC CCGAAATGAT CCACGGGATC AACTTCTTGC CCTTCCACGG TGGTTCGTTG
TACTTAGGCC GTAATCCAGC CTATGTCAAC AAAAACTACA GCCAAATGCG CAACAACATC
GGCGGCGCAG AACGTTATTG GTTAGATGTT ATTTGGCAAT TCCAAGCGTT TGGTGATGCA
GCAACCGCCG CAACCAAGTT TGATACGGTC GCCTATACCC CAGAAGAAGG CGAAACCAAG
GCTCATACCT ACCACTGGAT TCGCAACTTG AAGCAGTTGG GTTCGATCGA TACTTCGATC
ACCGCCAACA CGCCAACCTA TGCAGTTTTC AACAAAAATG GTGTACGCAC CTATGTTGCT
TGGAACCCAA CCGCGAACCC ATTGACCGTA ACCTTCTCGA ATGGCGTGGT GTTGAATAGC
ATTCCTGCAC GCAGCATGGC TCGCAGCACG GGCACAACCC CACCACCAAC CGCGACTCCG
GTCAACCCAA CCGCTACGCC AGTACTACCA ACTGCTACAC CAGTCAACCC AACCGCGACT
CCGGTCAACC CAACCGCTAC GCCAGTACTA CCAACTGCTA CACCAGTTGC CGGCTGTTCA
GCAGTGAGCT TGGATGCCAA TAGCTACTAT CGGGTAACGG CTCGTCACAG TGGCAAGGCC
TTGGATGTTG CGGATGTTTC AAGCGCTGAT GGGGCCAATG TGCATCAATG GGGCTATGTT
GGTGGCTTGA ACCAACAATG GCGCTTCGAA AGCGTTGGCA GCAACTACTT CAAAGTTACC
GCTCGCCATA GTGGCAAGGC GCTTGATGTT GCTGGCGGTA CAACCGCAAC TGGCAACGGT
GTCAACATTC ACCAATGGCC ATATGGCAAC ACCACCAACC AACAATGGTG TTTGCGCGAT
GTTGGTAGCG GCTACTATGC GATTATTGCC CGCCACAGTG GCAAGGCACT TGATGTTGCT
GATGCTTCAA CCGCCGATGG TGGCAATGTC CATCAATGGG ACTATGTCGG CGCAACCAAC
CAACAATGGC AACTCACCAA GATCGATGCT GGTGGCAACA CCTTGCACGT CATCGATGGC
GCTGCCCAAA ATGTAGCTGG TACGTTGAGC CTGAGCGCAG GCGCAGGGGC CAACACTGAC
AGCATTCCAT CGGCTGGCGG AGCTAACCGC GATGGTACGC CAACCAATGC CTTGGTTTAT
ACCATCTCAG GCTTGACCCG TACCTACAAC AGCCAAGCCA CCCAATTCAA GTTGTTCGTC
GATTCCAACA CTGCCGTGGG CAACGGGGTT CAAGCCCGCA TCTCCTACGA CTGGACTGGC
GACGGCAGCT ATGATCGCAC TGAAACCTAC AACTACTTCC CAACTGATCC GGTTGCAGGT
TTCGAGCAAT ATAGCCAAAC CGCTGGCCTC AAGAGCAGCA GTGGTGCTTG GGCCAACCTG
AGCAATGGTC GGGTACGGAT TGAAATTTGG AATGCAATTG GCAATGGTAC AGCGAGCGTT
CGCACCAGCG CCACCAGTGA CCAAGGCCAA CAATCGACCA TCACCTTGCC ATTCAATTAA
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| Protein sequence | MNTQHLPNRS RRLPWLAGTL LTLLTSSLFF SPTQPVANAD QAGLGSYTTT LPAGAKVPDD
FNGNPVSPKR TANVTGAMPT NDWWSSLGWQ RFPGNPYSEN MTALPLIVKA KATGLGVTFP
TIPAISTGSP NYIGEFHYNA SEDLNLGLVG LNSPDAKVDG YSDWTVTAYW NGGGTLRATF
GHGMPFVYLT KSGGDALISA AAPPSVWTGA GTNALGITVN GHHYGIFAPT GTTWSQSGNN
FQSNLAGKDY YSVAVLPDNS VATFNFFKSR AYAFVTNTTA SWSYDQASAT LNTTFSATTV
AKEGSNTNTV LGLYRHHAIN SSTALTNYSY TTARGQIRLR DGNSFTTAMR FNGVLPTLPD
AGDYNRTTLN NHLNDVAFEA SHFGGADTYY TGKALLRLAN LIPIAEQLGN TNARNALITA
VRNRLQEWFT ASANDTNGQF YYNSNWGTVI GYPASFGSDT ELNDHHFHYG YYIYAAAILA
QYDPNWALDS NWGSMVKLLI NDAANISTAT DPRFPRLRTF DIYEGHSWAS GHAGFGAGNN
HESSSEAMMF NSAVLLWGAN TGNTQLRDLG IFMYTHETHA IEQYWFNVDN AVFPAGFTAN
NNHPAVGMVW GDGGSYATWF SANPEMIHGI NFLPFHGGSL YLGRNPAYVN KNYSQMRNNI
GGAERYWLDV IWQFQAFGDA ATAATKFDTV AYTPEEGETK AHTYHWIRNL KQLGSIDTSI
TANTPTYAVF NKNGVRTYVA WNPTANPLTV TFSNGVVLNS IPARSMARST GTTPPPTATP
VNPTATPVLP TATPVNPTAT PVNPTATPVL PTATPVAGCS AVSLDANSYY RVTARHSGKA
LDVADVSSAD GANVHQWGYV GGLNQQWRFE SVGSNYFKVT ARHSGKALDV AGGTTATGNG
VNIHQWPYGN TTNQQWCLRD VGSGYYAIIA RHSGKALDVA DASTADGGNV HQWDYVGATN
QQWQLTKIDA GGNTLHVIDG AAQNVAGTLS LSAGAGANTD SIPSAGGANR DGTPTNALVY
TISGLTRTYN SQATQFKLFV DSNTAVGNGV QARISYDWTG DGSYDRTETY NYFPTDPVAG
FEQYSQTAGL KSSSGAWANL SNGRVRIEIW NAIGNGTASV RTSATSDQGQ QSTITLPFN
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