Gene Haur_1303 details

Gene Information

• Locus tag: Haur_1303
• ID: 5733196
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 1512953
• End bp: 1514962
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641278443
• Product: helicase domain-containing protein
• Protein accession: YP_001544079
• Protein GI: 159897832
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG0553] Superfamily II DNA/RNA helicases, SNF2 family

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGAAT TACGTCGCCA GCGTTATCTT GAGATTCTGG CCAGCCTGCC TGAGCCAACC 
TTTGAGCTTG AGCAGCTTGT CCAAGCATTG CCTGAGATTG ACCAGCCTGA AGTTGAAGCT 
GATCTCTTGC ATTTAGGCTT TGAGTTAGAT GAGCATTTGA TTCGAGCTGA TTTTGAATCG 
GCATTAACTC CCAATACGCG AACTACCCGC CCGCAAATTC CGGTTGCTGC GCCGCCACGC 
TTGCAAGCTT TGCCACCAAT TTTGGGCGAA TTACGTTTTC GCCCACCAAC TGATGGCGAA 
CGCGCACGCT TGCTCAGTGG TCACGTCACG CCAGCTGATC GTTGGGCAGT GCGCGAGCAA 
GCCGAACATT ACACGCTCAA AGGTGGCTTT GACCATCTAC TTTCGCTCGA ATATGCGGCG 
ATTGATGCTA AAGAATATCA ACTGCGGGCT GTGCGGCGAG TTTTGGGCGA GATGCATGGT 
AATGCAATTT TGGCCGATGA AGTTGGCTTG GGCAAGACGA TCGAAGCAGG CTTGATCATT 
AAAGAATATC ACTTGCGCGA AATGATTCGC ACTTGTTTGA TTTTAACCCC TGCCCCACTC 
TCTGAGCAAT GGCTCGAAGA AATGCACGAT AAATTTGGCA TGAATTTTCA TCGTTTAGGC 
GATGATAGTG ATATTGCTCA ATATCCTTTG GTGGTTGGCT CGATCGATCG GGCGAAAGGA 
GCCTATCGTA AAGCCTTAAC CGATCGTACT TGGGATATGT TGGTGATCGA TGAATGTCAT 
ATGCTCAAAA ATCACCGTAC TGGGCGTTAT AAATTTGTCT TCAATTTAAA TCGTAAGCAT 
TGTTTATTGC TCTCAGCAAC ACCAGTTCAA AACGAGCTGC GCGAATTATA TAATTTGATT 
ACGGTTGCAC GGCCTGGTCA TCTCAAAGGA CCACGCCAAT TCCAAAAATT GTTTATGGAA 
GATCGGCGGC ATGCTCGTAA TGTTGAACAT TTACGTGCTT TGCTTAACGA AGTGATGATT 
CGCAACCGAC GTTCAAATAC CTTGACTGAG TTGCCACCAC GCCTAATTCA TCATCATGAA 
ATTGAATTAA CTGATGATGA ACACGATTTT CACGATGCAA TGGTGCGTTT CTGCAAACAT 
ATCTATCAAC GTTACGTTGA GGGTGATATT GTTTTGCAAA GCATCGATGG CAAAGTTGTA 
GTTTCCAAAT TGGTGTTGGT GCTGATGACC TTGCTCAAGG AAATGACTTC GAGTCCTCGC 
GCGGTTGGAC ATACCTTACG TGGCGCGATG TCGGCGCGTT TGGGCAAGAT GGATGCTGCT 
GATAACGGCG AATTAGAACG TTTGCTGAAA ATCGTCGATG AGATGCAAAT TCCATCCAAA 
GCCCGCACAT TATTGAAAAT TATCAAAAAC GATGATAGCA AGATCATCGT GTATACCGAG 
TTTGTGGCAA CCCTTGAATT CCTGCGCGAT TTCTTGGTTG ATCACGGGGT TGAATCGGTG 
CTCTTTCACG GCGGCTTGAG CGGAATGCAA AAACGCAATG CAGTTGAGCG TTTCCGTGAT 
GGCAAGGCTC AAGTCTTTCT TTCAACCGAA AGTGGTGGTC AAGGGCTTAA CTTACAATTT 
TGCCATCGCC TGGTAAATTA CGATTTGCCA TGGAATCCAA TGCGAATCGA GCAACGGATC 
GGGCGGGTGC ATCGTTATGG TCAGGAACGA CCAGTTGAAA TTTATACTTT GATTTTACGC 
GGCACAATCG AAGAATATAT TTTACACGTG CTGACTGGTA AAATCGATAT GTTCCAAACC 
GTGATTGGCG AAATTGATGC AATGCTTTCA TTTATGCACG AACAACAAAG CCTTGAAGTG 
CGCATAACCG ATATTATTTT GCATTCCAAG AGCTTTGATG AAATTCGTGC TCAAATGGAG 
CAGCTTGGCG AAGAATTGCG CAAAGCCAAC GATACACTCA ACGAAGCTGA AAAAACTAAT 
GCAGCCTTGT TGGATAGTGT GTTGGGCTAG 

 

Protein sequence

MDELRRQRYL EILASLPEPT FELEQLVQAL PEIDQPEVEA DLLHLGFELD EHLIRADFES 
ALTPNTRTTR PQIPVAAPPR LQALPPILGE LRFRPPTDGE RARLLSGHVT PADRWAVREQ 
AEHYTLKGGF DHLLSLEYAA IDAKEYQLRA VRRVLGEMHG NAILADEVGL GKTIEAGLII 
KEYHLREMIR TCLILTPAPL SEQWLEEMHD KFGMNFHRLG DDSDIAQYPL VVGSIDRAKG 
AYRKALTDRT WDMLVIDECH MLKNHRTGRY KFVFNLNRKH CLLLSATPVQ NELRELYNLI 
TVARPGHLKG PRQFQKLFME DRRHARNVEH LRALLNEVMI RNRRSNTLTE LPPRLIHHHE 
IELTDDEHDF HDAMVRFCKH IYQRYVEGDI VLQSIDGKVV VSKLVLVLMT LLKEMTSSPR 
AVGHTLRGAM SARLGKMDAA DNGELERLLK IVDEMQIPSK ARTLLKIIKN DDSKIIVYTE 
FVATLEFLRD FLVDHGVESV LFHGGLSGMQ KRNAVERFRD GKAQVFLSTE SGGQGLNLQF 
CHRLVNYDLP WNPMRIEQRI GRVHRYGQER PVEIYTLILR GTIEEYILHV LTGKIDMFQT 
VIGEIDAMLS FMHEQQSLEV RITDIILHSK SFDEIRAQME QLGEELRKAN DTLNEAEKTN 
AALLDSVLG