| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1241 |
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| Symbol | |
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| ID | 5733149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1446021 |
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| End bp | 1447421 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641278381 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001544017 |
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| Protein GI | 159897770 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCCAG TTTTAGCCCA CGATGCCGCT CAAATCGACC ACATTTTAGC GCAGACCCTT
GCCACAGCCA AACAATTTCT CCACGATTTG CCACAGCGTC CGGTTGGAGT TGCGCCGCAA
AGCCACCAAC CAAGCCAATT ACCAAGCGCT GGATTAGGAG CCGAACAAAC GCTTGAGCAT
TTTTTGGCCC GCTACAGCGA TACATTAACT GGTAGCACTG GTCCGCGCTA TTGGGGCTTC
GTCACTGGCG GCGCAACTCC GGCAGCACTG GCAGGCGATT GGCTGGTCAG CACCTTCGAT
CAGAATCCAA GTGGCACAAC CGAAACCGCC GCGATTCGGG TTGAAAACGA AGCCATCAGC
ATGTTGCGCG AACTCTTTGG CTTGCCCACA AGCTTTAGCG GCGCATTCGT TTCTGGGGCA
ACGATGGCCA ATTTTGTCGG CTTGGCGATT GGGCGGCAAT GGGCGGCTCA ACAACTCAAC
CATGATGTTG CCCGCATGGG TTTATATGGG CTTGCGCCAA TTCCAGTTTT GAGCGGAGCA
CCGCACTCAA GCATTTACAA GGCCATGTCA ATGTTGGGCA TGGGTCGTCA ACAGCTGCAA
ACAATCGCCT TACAGCCCGA ACGCGAGGCG GTTGACATCG CAGCATTACG TCAAGCACTT
CAAGCCTTGT CAGCGAACCA ACCTGCGATC GTTGTTGCCA ATGCAGGCAC GGTCAATAGT
GTCGATTTTG ACGATCTTAT GGCAATTGCC GCGCTCAAGC AGGAATTCAA TTTCTGGTTG
CATGTTGATG CGGCTTTTGG TGGTTTTGCC GCCTGTTCGC CGCGCTTTGC TCATTTAGTG
CATGGGCTTG AACAAGCCGA TTCGCTGACG ATTGATGCCC ACAAATGGCT CAATGTGCCG
TATGATTCAG CTATGCAATT CACCCGCCAT AGTGCCTTGC AAGTTGAGGT GTTTCATAAT
AGCGCGGCCT ACCTCAGCCC AATTGGCGAG AATCCAGGCT TTTTTCATCG CACGCCCGAA
AATTCACGCC GTTGGCGAGC ACTGCCAGCA TGGTTCACGC TTATGGCCTA TGGCTCGGCT
GGCTATCAAG AAATGGTTGA GCGCGATTGC GATTTAGCCC AACTGCTGGC TAGCCATATC
AGCGATTCAC CGTTGTTTCG CTTGGTCGCG CCTGTGCGCA TGAACGTCGT TTGTTTCACT
TTGGCGGGCA ATCCTGATAG CACTACAATT CAGGCTTATC TTGATGCAGT ACGGGCTAGC
GGAGCAGTTT TTATGACCGC GACTGTCTAT GCTGGACAAC CAGCGATTCG CGCGGCCTTC
TCAAATTGGC GCACCACCAC CGCCGATGTT GGGCTGGCTT GGCAGGCAAT GGAGCGAGTC
GCCATAGAAC ATAGAGCATA G
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| Protein sequence | MHPVLAHDAA QIDHILAQTL ATAKQFLHDL PQRPVGVAPQ SHQPSQLPSA GLGAEQTLEH
FLARYSDTLT GSTGPRYWGF VTGGATPAAL AGDWLVSTFD QNPSGTTETA AIRVENEAIS
MLRELFGLPT SFSGAFVSGA TMANFVGLAI GRQWAAQQLN HDVARMGLYG LAPIPVLSGA
PHSSIYKAMS MLGMGRQQLQ TIALQPEREA VDIAALRQAL QALSANQPAI VVANAGTVNS
VDFDDLMAIA ALKQEFNFWL HVDAAFGGFA ACSPRFAHLV HGLEQADSLT IDAHKWLNVP
YDSAMQFTRH SALQVEVFHN SAAYLSPIGE NPGFFHRTPE NSRRWRALPA WFTLMAYGSA
GYQEMVERDC DLAQLLASHI SDSPLFRLVA PVRMNVVCFT LAGNPDSTTI QAYLDAVRAS
GAVFMTATVY AGQPAIRAAF SNWRTTTADV GLAWQAMERV AIEHRA
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