| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1240 |
|---|
| Symbol | |
|---|
| ID | 5733148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 1444386 |
|---|
| End bp | 1445822 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641278380 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_001544016 |
|---|
| Protein GI | 159897769 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCAA TTCCGCTCAA CCCCAACTTA ACTCGCCCGT TGTATTTGCA AATTGCCGAC
CATATTACGG CGTTGGCGCG GGCTGGTCAG TTGCAAGCCG ATCAACGCCT GCCATCATCG
CGTCAATTGG CCGAGCAACT AAATCTGCAT CGTTCAACAG TGGTTACTGC ATTCGATGAA
CTCCGAGCAC GCGGCATCAT TCAAACGCTG CACGGCAGCG GCAGTTATAT TTGCTCAGGT
CTGTTTGATC AAGCACTCCA AGCACCCAAA CCACAAGCAT TAACCACACC TGTGCTGGCC
AACGATCAGC TAATTGCTGA GTTGTGGCGT TTAAATCATG CCGAGGGGAT GATTTCGCTG
GCCTTGGGTG TGCCCGCTCC AGATATGTTT CCGAGCCAAC GCTTCGGCCA ATTGCAACAG
CGGATCGCCC GCCGCAACCC GCAAACTGCT TGGAATTACA CTCATCCCCA AGGCTTTTAT
CCATTACGTC AAGCGATTGC CAATGATCTC GCCCGCCATG GCATTCAAAC TAGTGCTGAA
CAATTGATTA TCACCAACGG CGCGAACGAA GCGATTAATT TGGTAACTCA AGCGCTGGCA
GTAACAGGCG ATAGCGGTTT GATCGAAGAA CCCTCGTTTC ATACAACGTT GCTTAATTTG
CAACAAGCGG GCATTCGGCT CAATGGCTTT GCAGTTACCC ATAATGGGCC AGATTGGGCA
AGTTTAAATG CGGCTTTACG CACGGGCTCA AGCCATCCAC GCTTTATTTT AGTTGTGCCC
GATTATCATA ATCCAACAGG CATGCGCTGG GCCAGCGACC AACGCTATCA ATTGTTAAAT
TGGGCCAATC AGCAGGCCAT TCCAATCATT GAAGATGCCA CCTATAGCGA TTTAGGTCTA
ACTGGCCCAA GTCAGCCAGC CCTGCGGGCC TTTGATCCGA ATGTGATTTA CATTGGCTCA
TATTCTAAAT CGTTGATGCC TGGCCTACGC ATTGGCTTTA TTGTCGCTAA TGGTCTGCTT
CAGCAACAAC TTGTCAGCTT GAAAACCATT ACCAGCGGTA GCAACGAATC GTTTAGCCAA
CAAATTCTGG CCGAATATCT GCATGCTGGC GAATATCACG AACAATTGGC ATGGGTTACC
AGCATCTACC AACAACGCCG CGATGCCCTG CTTGAGGCAA TTCAATGCTA TTTACCAACC
GAAGTTCATG CGACAATCGC CGATGGTGGG TTTTATAGCT GGCTGCATTT GCCAGCCGAT
CAGTCGATCA TGCGCTTGTT TCAACGCGCC TTACAGCGTG GCATAGTGAT TTTTCCGGGC
CAAGCTTTTT ACCTTAATCA GGCCAATCAA ACGCATAATG CTATTCGACT GTGTTTTGCC
CGTTACCCTG AGGACGTATT GACCCACGCC GTGCGGTTGC TCGGCAGTTG CTTTTAA
|
|---|
| Protein sequence | MLAIPLNPNL TRPLYLQIAD HITALARAGQ LQADQRLPSS RQLAEQLNLH RSTVVTAFDE
LRARGIIQTL HGSGSYICSG LFDQALQAPK PQALTTPVLA NDQLIAELWR LNHAEGMISL
ALGVPAPDMF PSQRFGQLQQ RIARRNPQTA WNYTHPQGFY PLRQAIANDL ARHGIQTSAE
QLIITNGANE AINLVTQALA VTGDSGLIEE PSFHTTLLNL QQAGIRLNGF AVTHNGPDWA
SLNAALRTGS SHPRFILVVP DYHNPTGMRW ASDQRYQLLN WANQQAIPII EDATYSDLGL
TGPSQPALRA FDPNVIYIGS YSKSLMPGLR IGFIVANGLL QQQLVSLKTI TSGSNESFSQ
QILAEYLHAG EYHEQLAWVT SIYQQRRDAL LEAIQCYLPT EVHATIADGG FYSWLHLPAD
QSIMRLFQRA LQRGIVIFPG QAFYLNQANQ THNAIRLCFA RYPEDVLTHA VRLLGSCF
|
|---|
| |