Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1226 |
Symbol | |
ID | 5733119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1418710 |
End bp | 1419783 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641278366 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001544002 |
Protein GI | 159897755 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAAG CACCCTTGCT TGAGGTCAAA AACCTACAAG TTCAATTTAA AACTGCTGAT GGCGTGGTCA ATGCTGTCAA TAATGTTTCA TTCTCGGTCA ATCGCGGCGA AACCTTAGGC ATCGTCGGCG AATCTGGCTC AGGCAAAAGC GTGACATCAC TTTCGATTAT GCGCTTGATT CCCTCGCCCC CAGGCAAAAT TGCTGGTGGC CAGATTTTAT TTGATGGTGA TAATCTTGTC GATTTTAGCG AGTCGGAGAT GCGTAAAATC CGTGGCAATC GGATTTCGAT GATCTTCCAA GACCCCATGA CTTCGCTCAA TCCGGTGCTA CGGATTGGTC GGCAGATGAC TGAATCGCTG CAATTGCACA TGGGGATGAC TCCCAAACAG GCGCGAAACC GAGCCATTGA CTTGCTCTCA ATGGTTGGGA TTCCAGCTCC TGACAAACGG CTTGATGATT TTCCCCATCA ATTTTCTGGC GGGATGCGCC AACGGGTGAT GATCGCTATG GGTTTGGCTT GTAACCCTGA GCTATTGATC GCCGACGAGC CAACGACAGC ACTCGATGTA ACTATTCAAG CGCAAATTCT CGAATTGCTT AACCGTCTGA AGAACGAGAC AGGCACGGCG ATTATTTTTA TCACCCACGA CCTTGGCGTT GTGGCGGGCA TGACCGATCG GGTGATTGTG ATGTATGCTG GACGGGTGGT CGAACAGGCC TCAACCAACG AGCTGTTCCA TAATCCCCGT ATGCCTTACA CCATCGGTTT GCTCGATTCG ATTCCCCGGC TTGATGGAAT CCAAACGCGC CTTACGCCAA TCCCAGGGCT ACCACCGGAT TTGCTGGAGA AAACCGAGCG CTGCCCATTT GCACCGCGCT GCGATTTTGT GCAAGAGCAA TGTTGGAGCG AAACGCCGAG TTTGCGCCAA GTTGCGCCTG AGCATACCGC TGCCTGTTTA TTCGAGATAG ATCGGGAACA GCGCCAAGCG ATGGCCGCCA AGAAGATTGC CGAAGAACAA GCCGCCTTGG ATGCTGCGCT TGAAGATGTT TTAGCCCACG AACAGGCATC GTAG
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Protein sequence | MAEAPLLEVK NLQVQFKTAD GVVNAVNNVS FSVNRGETLG IVGESGSGKS VTSLSIMRLI PSPPGKIAGG QILFDGDNLV DFSESEMRKI RGNRISMIFQ DPMTSLNPVL RIGRQMTESL QLHMGMTPKQ ARNRAIDLLS MVGIPAPDKR LDDFPHQFSG GMRQRVMIAM GLACNPELLI ADEPTTALDV TIQAQILELL NRLKNETGTA IIFITHDLGV VAGMTDRVIV MYAGRVVEQA STNELFHNPR MPYTIGLLDS IPRLDGIQTR LTPIPGLPPD LLEKTERCPF APRCDFVQEQ CWSETPSLRQ VAPEHTAACL FEIDREQRQA MAAKKIAEEQ AALDAALEDV LAHEQAS
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