Gene Haur_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1188 
Symbol 
ID5733081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1364922 
End bp1366547 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content52% 
IMG OID641278328 
ProductFHA domain-containing protein 
Protein accessionYP_001543964 
Protein GI159897717 
COG category[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms 
COG ID[COG1404] Subtilisin-like serine proteases
[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00110568 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGTC GCATTGCACT TGTTTTTTGT TTGATCTTGC TGGTCGGCAC GCCAGTCTAT 
GCCCAAAATG CCTTAACTGG CCCACCCAAC GACCCCGACG CAAATAAACA ATGGGTCATT
CGCCAACTTG GTTTAGCGTG TGCATGGGAG CATTTGACGG GTAACTCCGA TGTTACTGTG
GCCGTGATCG ACTCTGGCGT TGATATGAAC CACCCCGATT TGGTCGATGT CTTGCGCACC
GACGGCTTTG ATGCTGTCGA TGGCGATGAT GATCCATCGG ATGAGAATGG CCACGGAACC
CATGTTTCAG GCATTATTGC CGCCACCATC AACAACAGTA AAGGAATTGC AGGGGTTGCC
GGTGGGGGCA CGCGCATTTT GCCAATTCGG GTGATGGCTG CCGATGGTTC GGGCACGAAT
CAAGATATTA TTGCGGGCAT TCGCTATGCC GTTAGCAAAA ATGTCCAGAT CATCAATATG
AGCCTTGGCT CGATGTTACC GCTCGATAGC GAAGATATTG TTGAGGCAAT CAAAGAGGCC
GATGCCGCTG GCGTACTGGT GATTATCGCC GCTGGTAATT CGTTTGTGCC CTTGCCCAAC
TTCGCCTTTG GGGTTGAAGA ATTTGCCATG GTCGTGGCCG CAACTGATCC TGATGATCGC
AAAACCGATT TTTCGAACTA TGGTAAGTGG ATTTCGGTTT CGGCACCAGG GGCAGGCATT
TACTCAACAA TGCCCACCTA CGATGTGTAT ATGACCAGTC AGTTGCCTGC TGAAGAACGC
TTCAACAAAA ACTACGATCA AATGAGCGGC ACATCGCAAG CTACGCCAGT GGTTGCTGGC
TTGGCAGCCT TGCTATTTGC CCAACACCCC GATTGGAATG CCGACCAAGT ACGGGCTGAA
ATCGAAAAAA CTGCTGATGA TATTTCAGCG CAAAATCCGA TTAAGCGCTA TGGCCCAATC
ACCTATTTCG AGCCAAGCAA CCTTGGCAAA GGCCGTGTCA ATGCTTGCAA TGCCTTGGGT
GGCCCAGTTA AAGGTAGTGC TGCAGCAGTT GGCGGCCCTG AAGGAAAATC CAATTTAATC
ATGCTGCTTG GGTTTAGCGC GGTCATGTTG GTAGTTTTGG GCGGATTAAC CGTCTTTTTA
ATTCGCCGTC GCAAGCACAA CGCCCGCCCT GCGGCGATTC CCGCTGGTGG TTTTGCCCCA
CCGCCACCAA TTCATTATGA TCAAGCAATG GCCCAACAGC AACGCAACCT TGCCTCGCAA
CCAATCGTCG GATCAACGCC GCCATTGAAC CAGAGTTATG CCCCACCCAG CGCGGCTCCG
GCAGGCGGGC CAGCGTGGGG CAAATTAACG GTTGTCCGGG GAGCCGAATT GAACAAGTTC
TATTTGCTGC GTGAAAATCA AATTTTTATT GGCCGTGAAG CCTCGCTTGC CGTGGCAATT
AGCGGTGATA GCACCGTTTC ACGTCGCCAT ACGATCATCT ATCGTGATCC TCGTGGCATT
GAAATTGAAG ATGCAGGCAG CAGTCATGGC ACCAAAATCA ACGGCATTCC AGTACAAGGC
CGCCAACTGG TTCGACCAGG CGATGTGATC GAAGTTGGGC AGACCCATTT ACGTTTTGAG
GGTTAA
 
Protein sequence
MSRRIALVFC LILLVGTPVY AQNALTGPPN DPDANKQWVI RQLGLACAWE HLTGNSDVTV 
AVIDSGVDMN HPDLVDVLRT DGFDAVDGDD DPSDENGHGT HVSGIIAATI NNSKGIAGVA
GGGTRILPIR VMAADGSGTN QDIIAGIRYA VSKNVQIINM SLGSMLPLDS EDIVEAIKEA
DAAGVLVIIA AGNSFVPLPN FAFGVEEFAM VVAATDPDDR KTDFSNYGKW ISVSAPGAGI
YSTMPTYDVY MTSQLPAEER FNKNYDQMSG TSQATPVVAG LAALLFAQHP DWNADQVRAE
IEKTADDISA QNPIKRYGPI TYFEPSNLGK GRVNACNALG GPVKGSAAAV GGPEGKSNLI
MLLGFSAVML VVLGGLTVFL IRRRKHNARP AAIPAGGFAP PPPIHYDQAM AQQQRNLASQ
PIVGSTPPLN QSYAPPSAAP AGGPAWGKLT VVRGAELNKF YLLRENQIFI GREASLAVAI
SGDSTVSRRH TIIYRDPRGI EIEDAGSSHG TKINGIPVQG RQLVRPGDVI EVGQTHLRFE
G