| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1142 |
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| Symbol | |
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| ID | 5733034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1306365 |
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| End bp | 1308260 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641278281 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001543918 |
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| Protein GI | 159897671 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCGGA AATTGAAATG GCCACTCGCT GGAGCATGGC AACGCCGCTT GATTAAAGCA
ACTCGCCGTA AAGATGTAAC GCTTGAGCAA TTTCCGGTTG GCTTGGTTTG GTTTCAAGGC
TCACAGGTTT TTTTTAATCA AGCGGTCACG GCGATGATTG GCTATAGCAA TGCGGAAATT
GCGACAACTG AGCAATGGTT TAGCACCTTG TATGGCCCTG AAGCCGCCAG CATGCGCCAA
TTGTATGCAA CAACCTCGGC AGCGACCTTA GGCCAGACAA TCCATGGCTT TGTCGTGAAT
CGCCAGAACC AAAGTTGCCT TTTAGAATGT ACGTTGGCTT CCCATGGCCA TCGTCAGGTT
TGGTTGGTAC GCGATATTAC CGAGAGCAAT CGGCTTGAGC GCTTGCTGTT GCAAACTGAA
CAAACCGCCC GCGTCGGCGG CTGGGAGATC GATTTGCGCA CCAACCAAGT ATTTTGGACG
CGCGAAATGT ACCATATTTT GGATACCACA GCACACGAAT ACACGCCCAC GATTGAGAAT
CAGAATTTTT TCCATACCAA TGCCACGTTA ATCCAACTTG AGGCAATTTT TCGCCAAATG
ATCGAGCAGC GTGGCTCGTT TGATATGAGT GTGGAAATGC GGACGTTTCG GGGGCGTTCG
TTCTGGGGTC GTTTTACTGG GCGAGTTGAG CTAGAGTTTG GCCAGCCAAT CAAAATTTAT
GGCTCGTTGC AAGATGTAAC TGAGCACCAT CAATTAACTG AGGCCTTGCG GGTGGCCGAG
CACGACTATC GCACAATTTT TGAAACCACC AAAATTGGCA TCTTTCGCAT TACTCCCGAT
GGACGGGTGT TACGGGCTAA TCCGGCGTTG GTGCGCTTGG CGGGCTTTGC CCATGAACAT
GAATTGGTCG ATTATGTGGC CGATTTAACC ACGATGTATG TTGAGCCGCA GCGCTTTGAA
TACTTGCGTG AGCTGCTGCA AACCAATGGC TCGTATGATG AAATTGAATC GGAAGTTTAT
CGGCCTGCCA CTGGCGAACG GATTTGGATC AGCGAGACCT CGCGTTTGGT GTATGCTGAG
GATGGCTCGA TGCTCTACGC CGAAGGCACG ATTCAAGAAA TTACGGCACG CAAACAGGTC
GAAGAGGCGT TGCGCCATGC CCGTGATGCT GCCGAAGCCG CCAATCATGC CAAAAGCACT
TTTTTGGCCA ATATGAGCCA CGAGCTGCGC ACGCCACTGA ATGCAATTAT TGGCTATAGC
GAATTGCTGA TGGACGATAC TGATTTTGAT GATCCGACGA TGGTTGAGCA GTTTCGCCAT
GATATTGCGC AAATTAATGA TGCAGGTCAT CAATTGCTCA ATTTGGTCAA CGATGTGCTT
GATTTGGCCA AAGTTGAGGC TGGCAAATAT CAAGTTGCTG CTGAAACCTT CGATCTCAAC
AGCCTTGTAC GTGATTTGAT TGCCACAATT AACCCAATGG CTCAGAAAAA TGCCAATAGC
CTTTACTTTG AGCCAAACAA ACATCTGCCG TTAATTCATA CTGATCGCTC GATGTTGCGC
CAGATTTTGC TGAATTTATT GAGTAATGCC GCCAAATTTA CCAAAGCAGG CAGCATCAAC
ATCAGCGTCA GCTTTGATCC AGCCAGCCAA CATGTGCAAT GTCGGGTGCG CGATACTGGC
ATTGGTATGA ACGATGAGCA AATGCAGCGT TTGTTTGAGC CATTTACCCA AGGTGATGCC
TCGACGACGC GGCGCTATGG TGGCACTGGC TTGGGCTTGG CGCTTTGTCG CCATTTTATC
GAACTATTGA ATGGCTCAAT TCAAGTTGAA AGTGTCTTTG GCCAAGGCTC GATCTTTACC
ATTGTCTTTC CATGCTTGGT TGAGGCAATT GATTAG
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| Protein sequence | MPRKLKWPLA GAWQRRLIKA TRRKDVTLEQ FPVGLVWFQG SQVFFNQAVT AMIGYSNAEI
ATTEQWFSTL YGPEAASMRQ LYATTSAATL GQTIHGFVVN RQNQSCLLEC TLASHGHRQV
WLVRDITESN RLERLLLQTE QTARVGGWEI DLRTNQVFWT REMYHILDTT AHEYTPTIEN
QNFFHTNATL IQLEAIFRQM IEQRGSFDMS VEMRTFRGRS FWGRFTGRVE LEFGQPIKIY
GSLQDVTEHH QLTEALRVAE HDYRTIFETT KIGIFRITPD GRVLRANPAL VRLAGFAHEH
ELVDYVADLT TMYVEPQRFE YLRELLQTNG SYDEIESEVY RPATGERIWI SETSRLVYAE
DGSMLYAEGT IQEITARKQV EEALRHARDA AEAANHAKST FLANMSHELR TPLNAIIGYS
ELLMDDTDFD DPTMVEQFRH DIAQINDAGH QLLNLVNDVL DLAKVEAGKY QVAAETFDLN
SLVRDLIATI NPMAQKNANS LYFEPNKHLP LIHTDRSMLR QILLNLLSNA AKFTKAGSIN
ISVSFDPASQ HVQCRVRDTG IGMNDEQMQR LFEPFTQGDA STTRRYGGTG LGLALCRHFI
ELLNGSIQVE SVFGQGSIFT IVFPCLVEAI D
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