Gene Haur_1140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1140 
Symbol 
ID5733032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1303658 
End bp1304479 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content49% 
IMG OID641278279 
Productrare lipoprotein A 
Protein accessionYP_001543916 
Protein GI159897669 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4305] Endoglucanase C-terminal domain/subunit and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000289484 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGTTC GCACTCATGC TGTACGTTGG CTATTGTTTG TAAGTTTGTT CATGGTGATA 
TTTGGGAGTT ATGCTTGGCA GCAACAGAGC TTTGCCCAAA ATCCGGCCAC AATCACCAAT
CCATGGGCAA TTCGCCAAGG CCAAGCTACC TATTACACCG CCACTGGTTT GGGCAATTGT
AGTATTCCTG TGCCCAGCGA TTTGCTATTT GGAGCTATGA ATAACCCCGA TTATGCCACC
GCTGATTATT GTGGCGCGTT CGTTAAAATT ACAGGGCCAT TAGGATCGGT CACAGTTCAA
ATTACCGACC GCTGCCCTGA ATGCCAAACT GGGCATATCG ACCTCAGCCC GCAAGCCTTC
GATCGCATCG CTAATCGAGT TACGGGCATT GTGCCAATTA CTTGGCAATT AATCAGCAAT
CCAGCGACCA CAGGCAAGGT CAGTTATCAT TTTAAAGATG GTAGCAGTCA ATGGTGGACG
GCGGTGCAGC CCCGCAATCA TCGTAATGCG ATTGCCAAAT TTGAATATCG CATGGGTCAG
GCGGCGTATA AAGTTGCTCC ACGCTTTATT TTCAATTATT TTATTGCCGA GGCTGGCATG
GGTACTGGCC CCTACAGCTT TCGCACCACC GATGTGTATG GCAATATGAT TGTTGATGAA
AATATTGTGC TTGGTGATGA TGTAATTCGC ACTGGGACTC AGCAATTTCC CTATATGGCT
CCGCCTGGCT CGGCCACCCC AACCCCCAGC CCAACGCCAC GGCCAACCAT CCCACCCGAA
AGCCTAACTG AACATGTTTG GCTGCCTTAT ACTCGTAAAT AG
 
Protein sequence
MLVRTHAVRW LLFVSLFMVI FGSYAWQQQS FAQNPATITN PWAIRQGQAT YYTATGLGNC 
SIPVPSDLLF GAMNNPDYAT ADYCGAFVKI TGPLGSVTVQ ITDRCPECQT GHIDLSPQAF
DRIANRVTGI VPITWQLISN PATTGKVSYH FKDGSSQWWT AVQPRNHRNA IAKFEYRMGQ
AAYKVAPRFI FNYFIAEAGM GTGPYSFRTT DVYGNMIVDE NIVLGDDVIR TGTQQFPYMA
PPGSATPTPS PTPRPTIPPE SLTEHVWLPY TRK