Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1140 |
Symbol | |
ID | 5733032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1303658 |
End bp | 1304479 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641278279 |
Product | rare lipoprotein A |
Protein accession | YP_001543916 |
Protein GI | 159897669 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4305] Endoglucanase C-terminal domain/subunit and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000289484 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGTTC GCACTCATGC TGTACGTTGG CTATTGTTTG TAAGTTTGTT CATGGTGATA TTTGGGAGTT ATGCTTGGCA GCAACAGAGC TTTGCCCAAA ATCCGGCCAC AATCACCAAT CCATGGGCAA TTCGCCAAGG CCAAGCTACC TATTACACCG CCACTGGTTT GGGCAATTGT AGTATTCCTG TGCCCAGCGA TTTGCTATTT GGAGCTATGA ATAACCCCGA TTATGCCACC GCTGATTATT GTGGCGCGTT CGTTAAAATT ACAGGGCCAT TAGGATCGGT CACAGTTCAA ATTACCGACC GCTGCCCTGA ATGCCAAACT GGGCATATCG ACCTCAGCCC GCAAGCCTTC GATCGCATCG CTAATCGAGT TACGGGCATT GTGCCAATTA CTTGGCAATT AATCAGCAAT CCAGCGACCA CAGGCAAGGT CAGTTATCAT TTTAAAGATG GTAGCAGTCA ATGGTGGACG GCGGTGCAGC CCCGCAATCA TCGTAATGCG ATTGCCAAAT TTGAATATCG CATGGGTCAG GCGGCGTATA AAGTTGCTCC ACGCTTTATT TTCAATTATT TTATTGCCGA GGCTGGCATG GGTACTGGCC CCTACAGCTT TCGCACCACC GATGTGTATG GCAATATGAT TGTTGATGAA AATATTGTGC TTGGTGATGA TGTAATTCGC ACTGGGACTC AGCAATTTCC CTATATGGCT CCGCCTGGCT CGGCCACCCC AACCCCCAGC CCAACGCCAC GGCCAACCAT CCCACCCGAA AGCCTAACTG AACATGTTTG GCTGCCTTAT ACTCGTAAAT AG
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Protein sequence | MLVRTHAVRW LLFVSLFMVI FGSYAWQQQS FAQNPATITN PWAIRQGQAT YYTATGLGNC SIPVPSDLLF GAMNNPDYAT ADYCGAFVKI TGPLGSVTVQ ITDRCPECQT GHIDLSPQAF DRIANRVTGI VPITWQLISN PATTGKVSYH FKDGSSQWWT AVQPRNHRNA IAKFEYRMGQ AAYKVAPRFI FNYFIAEAGM GTGPYSFRTT DVYGNMIVDE NIVLGDDVIR TGTQQFPYMA PPGSATPTPS PTPRPTIPPE SLTEHVWLPY TRK
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