Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1105 |
Symbol | |
ID | 5732996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 1265195 |
End bp | 1266835 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641278243 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001543881 |
Protein GI | 159897634 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGCAGC ATCGTAAATT AACCCTCGTT CAACGCTTTG GGCAGCGCTT TGGCACGCTA CGCTGGAAAC TCACATGGTC GTATGTGTGG ATCAGCGTAG CGTTGACTTT GTTGATTAAT GGTTTGGCGT TTGGTTTAGT GATGGGTGCT GCTCCACCGC TCAATGCTCC CGCCTTGCTT AGCGCCGCCC AAAATCATGC CGCTGAGTTT AGCGAGGTTT TGCAAGAGCC AACCGATCAG CACACAATCC AACAGTTGTT ACGCTATCGC TTTGGTTCGT TGCGCGGCCA ATTTCTGCAA AATAACCTTG AATTAGCGAT TAGCAATACT ATCAATAATT CTCCCAGCGA TCTTTCGCAG GAAATGATTT TGATGCCAGC TGAGGTATTT TCGCCTGAAG CGACCAATGT GTTTAGCGAG AGCTACCACC TCTTATTGCT TGATGCGCAG GGTAATGTGC TCGGCGGGAC ATTTCCCAGC CGTACTCCGG CGGGCCAGCC CTGGAACGAT GCGATAGTGG GCAATGATCG ACGGGTTGTG CAGGCAGCAC TTGCTGGCAG CGACGATATC GATCAATTAA CTTGGAAGTA TGAGAATTAT TTAGTGATTG CCACTCCAGT TCGCGATCAA GCCAACCAAG TGATTGGGGC ACTGTATGTA CGTTCGCGGC CACTTAGCCA AAATCAAGTG ATTGTTGCAT TGTTGATGTT TGTTATTTTT ATTGCCAGTT CAATTGTTTC GATTATTGCC AATGCCTTAA TTGGCATGGT CTATGGCTGG TTTGTGGCCC GTAATTTTGT GCGCCGTTTG GTGCATCTCA CCCAAGCTAC CGATAGTTTG GCCGCTGGCG ATTTGAGCGT GCGGGTCAAC GATGGATCAA TCGACGAAAT TGGGCATTTG GCGCGGCGCT TCGACAGCAT GGCCCAACAG CTTGAATCAA ATGTCAAAAT GTTACGTCAA CTAGCTGATC GCAATGCTGC CTTAGTTGAG CAGGCAGGCC AATTGGCAAT CGTCGAGGAG CGTAATCGGT TGGCTCGCGA TTTGCACGAT AGCGTTAGCC AAGAGTTATT TAGCGTCACG ATGTTGGCGG CGGCTGCGCG TAATTTATTG CCAGCCCAGC CCGATAAAGC GCGTAGCCAA GTTGAACAAC TCAGCCAAAT GGCCCAACGC GCCTTGCACG AAACTCGTGG CTTGATCTTC GCACTTCGGC CTGCTGCGCT CGGTGATCAA GGTTTAGTCC CAGCATTACG TCAACTTACC GAAGAGGCAG CGCGTCGCCA AGGCTTGCAG ATTGAACTGA ATACCAACGG CGAACGGCGC ATTCCCTTAG ATCATGAGCA GGCACTCTAT CGGATTTGCC AAGAAGCCTT GGCCAATGTG ACCAAGCATA GCGGCGTGAA CAGCGCCAGC GTAAGCCTTG AATATGAAGC CCATCGCACC ACTTTAGAGG TGCGCGATCG TGGCCGTGGC TTTGATCAAG ATAAACCGCG CAATTCGCAC TCGCTAGGCT TGATTAGCAT TCAAGAACGC GCCAAAGCAG TTGGCGGCAC AGTTGAATTA ACTGCTGCGC CAGGCCAAGG CACAAGCCTA CGCATCGTTG TACCACGAAC CCAAACTGGG CTACTGGTCG AGCCACGTTG A
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Protein sequence | MQQHRKLTLV QRFGQRFGTL RWKLTWSYVW ISVALTLLIN GLAFGLVMGA APPLNAPALL SAAQNHAAEF SEVLQEPTDQ HTIQQLLRYR FGSLRGQFLQ NNLELAISNT INNSPSDLSQ EMILMPAEVF SPEATNVFSE SYHLLLLDAQ GNVLGGTFPS RTPAGQPWND AIVGNDRRVV QAALAGSDDI DQLTWKYENY LVIATPVRDQ ANQVIGALYV RSRPLSQNQV IVALLMFVIF IASSIVSIIA NALIGMVYGW FVARNFVRRL VHLTQATDSL AAGDLSVRVN DGSIDEIGHL ARRFDSMAQQ LESNVKMLRQ LADRNAALVE QAGQLAIVEE RNRLARDLHD SVSQELFSVT MLAAAARNLL PAQPDKARSQ VEQLSQMAQR ALHETRGLIF ALRPAALGDQ GLVPALRQLT EEAARRQGLQ IELNTNGERR IPLDHEQALY RICQEALANV TKHSGVNSAS VSLEYEAHRT TLEVRDRGRG FDQDKPRNSH SLGLISIQER AKAVGGTVEL TAAPGQGTSL RIVVPRTQTG LLVEPR
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