| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1084 |
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| Symbol | |
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| ID | 5732873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1240956 |
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| End bp | 1242530 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641278222 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001543860 |
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| Protein GI | 159897613 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00214537 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGTA TCCTGGTCAC GGAGAAGATT GGTGCCGAAG GCCTTGCGGC GCTTAAAGAG
GTCGCCGAGG TTGATGTTCG TCTTGATCTT ACACCAGAAA CCCTGTTGGA GGCTTTGCCA
CAGTACGATG CCTTGATCGT GCGTTCGCAA ACCAAAGTTA CCGCTAAAGT GCTTGCCGCA
GGCACCAAAC TTCGAGTTGT TGGCCGCGCC GGGACGGGTG TTGACAACAT CGATTTGGCC
GCCGCCAATC AGCAAGGAAT TTTGGTGGTC AATGCTCCAG CATCAAACAG TATTGCAGTC
GCTGAACTGA CGATTGGTTT GATGATTGGT CTTGCTCGTA ACATTCCCCA AGCCCACACT
GCCTTGCAAA ATGGCAAATG GGAACGCAGC AAATATGGCG GTTGGGAAGT ACGCGGCAAA
ACTTTAGGCT TGGTCGGCTT TGGCCGAATT GCCTCAGAAG TTGCTCGTCG CGCCCGCGCC
TTGGAAATGA ATATTATCGC CTACGACCCA ATTATCAATG CTGAACGTGC AGCCCAACTT
GGTGTGACCC CAGTAACGCT TGATGAATTA ACCAGCCGCG CTGATGTTAT TTCATTGCAC
ATTCCATTGA TCGATGCTAC GCGCAATTTG TTCGATGCCC AACGCCTGAG CCAAATGAAA
AAAGGCAGCT ATATCATCAA TTGTGCCCGT GGTGGCGTGA TCGATGAAGA AGCCTTGTTC
GAAGCTTTGG AATCAGGCCA TCTTGGCGGC GCAGCCCTCG ACGTATTTGC CAAAGAGCCA
CCAACTGGCC CCATCGTTAC CCACCCCAAA GCGATTGTCC TGCCGCACTT AGGCGCTTCA
ACCGAAGAAG CTCAAGCCTT GACCGCCGCC GATGTGGCCG AAGGGATTGT TGATGTATTG
GCTGGGCGAT CACCACGCTA TGCAGTCAAC GCACCGTTTG TTGCGCCAGA AGAGTGGGCA
ATCGTTGGGC CATATCTCGA TCTTGGCCGC AAATTAGCGC GGCTCAGCAC TCAATTGGTC
GATCTGCCAG CCCAATCGTA TCAAATTGTC TACAACGGTG CTTTGGCAGG CCTGACCAGC
GAACCAATTA AGTTAGCCGT TTTGCAAGGC TTGCTCGAAG GCGGCTCAGA AGGTCGGGTT
ACTCCGGTTA ATGCGCCATT CTTGGCTCGC GAACGCGGCT TAACCATCAA CGAAACTCAT
CGCCCCGATG CTGAAACCTA CACCGAATTG TTGCAATTGG TGGTGACCAC CAGCGATGGT
GTGGTGCATA CCTTCGGCGG AACGGTGGTA CGTGGCGAGG CTCACATCGT CCAAATCAAC
GAATTTTGGC TCGATTTGGT GCCAACCAGC TCGATGTTAT TCACCTTCCA CCAAGATCGG
CCTGGCTTTA TCGGGCGGAT TGGCACATTG CTGGGCACGG CTGATATCAA CATTTCGGCG
ATGCACGTTG GTCGCTCAAG CCCACGCGGC ACAGCAATTA TGGTGCTCAC GGTTGATGAA
GCCATTCCAA GCGAGACCCT AACCGATATT AACAACCAAG TTGATATCGA ACGCGCCTAC
AGCGTGTTGC TCTAA
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| Protein sequence | MDRILVTEKI GAEGLAALKE VAEVDVRLDL TPETLLEALP QYDALIVRSQ TKVTAKVLAA
GTKLRVVGRA GTGVDNIDLA AANQQGILVV NAPASNSIAV AELTIGLMIG LARNIPQAHT
ALQNGKWERS KYGGWEVRGK TLGLVGFGRI ASEVARRARA LEMNIIAYDP IINAERAAQL
GVTPVTLDEL TSRADVISLH IPLIDATRNL FDAQRLSQMK KGSYIINCAR GGVIDEEALF
EALESGHLGG AALDVFAKEP PTGPIVTHPK AIVLPHLGAS TEEAQALTAA DVAEGIVDVL
AGRSPRYAVN APFVAPEEWA IVGPYLDLGR KLARLSTQLV DLPAQSYQIV YNGALAGLTS
EPIKLAVLQG LLEGGSEGRV TPVNAPFLAR ERGLTINETH RPDAETYTEL LQLVVTTSDG
VVHTFGGTVV RGEAHIVQIN EFWLDLVPTS SMLFTFHQDR PGFIGRIGTL LGTADINISA
MHVGRSSPRG TAIMVLTVDE AIPSETLTDI NNQVDIERAY SVLL
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