Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1062 |
Symbol | |
ID | 5732966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1215012 |
End bp | 1215875 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641278197 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001543838 |
Protein GI | 159897591 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAATG CACGAACTGA GCAACGCCGT GCCTGGTTGC AAGCCTCGCC TGCCCTGATT TGGCTGGGCT TCTTCTTTTT GGCTCCCTTG GTGCTCATTT TAATTTATTC ATTTCAAGGC CGCGCCGACG ATGGCACGGT GCTCTGGAAT TGGTCGCTGG CGAACTATCA AAAGCTGTTT GCTGATGGTG CGTTTTGGCG CACGCTCTGG CTTTCGACTT GGATTGCGCT GGTGGTAACT GCGATCACCT TGGTGGTCAG TTATCCCTTG GCCTTTTTTA TGGCAACCCG CAGCCCTAAA ATTCGTGGTG TGTTGGTGCT TGCGGTCATG ATTCCCTTTT GGACCAACTT TCTGGTGCGG ATTTACGCCT GGAAAGTGCT GCTGGGCAAT AATGGCGTGC TCAATCGCTT TTTAGGCCAA TTTGATCTGG GGCCGTTGCA AATTATCAAT AGCCCTAGTG CGGTGATTAT GGCGCTAATT TATGGCGAGT TGCCGTATAT GATTTTGCCT TTATATGCGG CGCTCGAACG TTTTGATTGG GTGCAACTTG AGGCGGCCCG CGATTTAGGC GCTGGGCGAT TTCAAACATT TTGGCGGGTG CTCTTGCCCC AAACCTTGCC AGGCATTACG GCTGGCTCAA TTTTGGTGTT TGTGCCAACG GTTGGCACTT TCGCCGTCTC AGATATTTTG GGTGGCACAA GCGTGAATAT GGTTGGTAAT ACCTTGAGTT TGCAATTTGG TTCGGCCTCG AATTGGGCCT ATGGCTCAGC GATTTCGATG ATTTTTATGC TGTTACTCTT GGGCGCAATC TTGCTCTATT TCAAAGCCAC ACGGGAGGTG AATGATGGCG AAAATCCTGG CTGA
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Protein sequence | MYNARTEQRR AWLQASPALI WLGFFFLAPL VLILIYSFQG RADDGTVLWN WSLANYQKLF ADGAFWRTLW LSTWIALVVT AITLVVSYPL AFFMATRSPK IRGVLVLAVM IPFWTNFLVR IYAWKVLLGN NGVLNRFLGQ FDLGPLQIIN SPSAVIMALI YGELPYMILP LYAALERFDW VQLEAARDLG AGRFQTFWRV LLPQTLPGIT AGSILVFVPT VGTFAVSDIL GGTSVNMVGN TLSLQFGSAS NWAYGSAISM IFMLLLLGAI LLYFKATREV NDGENPG
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