Gene Haur_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1062 
Symbol 
ID5732966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1215012 
End bp1215875 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content50% 
IMG OID641278197 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001543838 
Protein GI159897591 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAATG CACGAACTGA GCAACGCCGT GCCTGGTTGC AAGCCTCGCC TGCCCTGATT 
TGGCTGGGCT TCTTCTTTTT GGCTCCCTTG GTGCTCATTT TAATTTATTC ATTTCAAGGC
CGCGCCGACG ATGGCACGGT GCTCTGGAAT TGGTCGCTGG CGAACTATCA AAAGCTGTTT
GCTGATGGTG CGTTTTGGCG CACGCTCTGG CTTTCGACTT GGATTGCGCT GGTGGTAACT
GCGATCACCT TGGTGGTCAG TTATCCCTTG GCCTTTTTTA TGGCAACCCG CAGCCCTAAA
ATTCGTGGTG TGTTGGTGCT TGCGGTCATG ATTCCCTTTT GGACCAACTT TCTGGTGCGG
ATTTACGCCT GGAAAGTGCT GCTGGGCAAT AATGGCGTGC TCAATCGCTT TTTAGGCCAA
TTTGATCTGG GGCCGTTGCA AATTATCAAT AGCCCTAGTG CGGTGATTAT GGCGCTAATT
TATGGCGAGT TGCCGTATAT GATTTTGCCT TTATATGCGG CGCTCGAACG TTTTGATTGG
GTGCAACTTG AGGCGGCCCG CGATTTAGGC GCTGGGCGAT TTCAAACATT TTGGCGGGTG
CTCTTGCCCC AAACCTTGCC AGGCATTACG GCTGGCTCAA TTTTGGTGTT TGTGCCAACG
GTTGGCACTT TCGCCGTCTC AGATATTTTG GGTGGCACAA GCGTGAATAT GGTTGGTAAT
ACCTTGAGTT TGCAATTTGG TTCGGCCTCG AATTGGGCCT ATGGCTCAGC GATTTCGATG
ATTTTTATGC TGTTACTCTT GGGCGCAATC TTGCTCTATT TCAAAGCCAC ACGGGAGGTG
AATGATGGCG AAAATCCTGG CTGA
 
Protein sequence
MYNARTEQRR AWLQASPALI WLGFFFLAPL VLILIYSFQG RADDGTVLWN WSLANYQKLF 
ADGAFWRTLW LSTWIALVVT AITLVVSYPL AFFMATRSPK IRGVLVLAVM IPFWTNFLVR
IYAWKVLLGN NGVLNRFLGQ FDLGPLQIIN SPSAVIMALI YGELPYMILP LYAALERFDW
VQLEAARDLG AGRFQTFWRV LLPQTLPGIT AGSILVFVPT VGTFAVSDIL GGTSVNMVGN
TLSLQFGSAS NWAYGSAISM IFMLLLLGAI LLYFKATREV NDGENPG