Gene Haur_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0997 
Symbol 
ID5732900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1140463 
End bp1141755 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content52% 
IMG OID641278131 
Producthypothetical protein 
Protein accessionYP_001543773 
Protein GI159897526 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03440] conserved hypothetical protein TIGR03440 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0142804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCGT CGCTTTCAGC GATGCCTGTG CAAGCCCGCC AAGCTCGTTT GATTGAACAC 
TATCAGACAG TGCGCCAATT CTCGGAGTAT CTTTGTGAGC CGCTTGTAAC CGAAGATTAT
GTGATTCAGT CGATGCCTGA TGTTAGCCCA ACCAAGTGGC ATCTTGCCCA TACCAGTTGG
TTTTTTGAAA CGTTTGTACT GACCCAAGCC GTGCCCAACT ACCAAACCTT ACACCCTCAA
TATGCTTACC TCTTTAATTC GTATTATGTA ACGCTCGGCA AACGCCATTG TCGCCCCAAA
CGTGGCTTGA TTTCGCGGCC AACCGTCGAG GAAACCTACC GCTACCGTGC CTATGTTGAT
CAGCAGATGT TGGCCTTGTT GATTGCGATG GATGCCGAAA CCTTTGCCCG TTGGGAGCCA
ATTCTCGATT TGGGGATTCA TCACGAGCAG CAGCATCAAG AATTAATGTT GACTGACCTC
AAGCATGTTT TTTCAGAAAA CCCCTTGCGC CCAGCCTACC GTGAATTTGC CCCAAGCAAC
CAACAGCCTG CCGCACCATT GCGTTGGCTC AGCTATCCCG AAGGCATTGT TTGGCTTGGC
TATGAAGGTC AAAGTTTTGC CTTCGATAAT GAATCGCCGC GTCATCGCCA ATTTGTACAC
AGTTTCAAAT TGGCCTCACG GCTTGTCACC AACGGTGAAT ATTTGGCGTT TATCGAAGAT
GCTGGCTATG CCCGCCAAGA TTTGTGGCTC TCATCAGGCT GGTACACCCG CGAAGATGCT
GGCTGGACTG CGCCGCTGTA TTGGGAGCAA CTCGATGGGG TGTGGCAGCA GATGACGCTT
GGTGGTTTGC GACCGCTTGA TCTAGCCGAG CCTGTTTGTC ATCTCAGCTA TTATGAAGCC
GATGCTTTTG CCCGTTGGGC GGGCAAGCGC TTGCCCACCG AAGCCGAATG GGAGTTGGCA
GCCCAAACCG TGCCGCTCGA TGGATCATAC GCTGATGCAG GCCGCTATCA CCCAACAGCG
CTCAATCTCG ATAATAGCAC TTTGCCCCAA CAAATGTTTG GCGAAGTTTG GCAATGGACC
CAAAGTGCCT ACTCGCCATA TCCTGGGTTT CAGCCAGCAG CAGGCGCACT AGGCGAATAC
AATGGCAAAT TTATGTCGGG GCAATATGTT TTGCGCGGCG CTTCATGTGC CACCTCGCGC
TCCCATGCCC GCCTGACCTA TCGCAATTTC TTCCCACCCG ATGCCCGTTG GCAATTTAGT
GGCTTGCGCT TGGCAGCAGA TGGTGAAGCA TGA
 
Protein sequence
MDSSLSAMPV QARQARLIEH YQTVRQFSEY LCEPLVTEDY VIQSMPDVSP TKWHLAHTSW 
FFETFVLTQA VPNYQTLHPQ YAYLFNSYYV TLGKRHCRPK RGLISRPTVE ETYRYRAYVD
QQMLALLIAM DAETFARWEP ILDLGIHHEQ QHQELMLTDL KHVFSENPLR PAYREFAPSN
QQPAAPLRWL SYPEGIVWLG YEGQSFAFDN ESPRHRQFVH SFKLASRLVT NGEYLAFIED
AGYARQDLWL SSGWYTREDA GWTAPLYWEQ LDGVWQQMTL GGLRPLDLAE PVCHLSYYEA
DAFARWAGKR LPTEAEWELA AQTVPLDGSY ADAGRYHPTA LNLDNSTLPQ QMFGEVWQWT
QSAYSPYPGF QPAAGALGEY NGKFMSGQYV LRGASCATSR SHARLTYRNF FPPDARWQFS
GLRLAADGEA