| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0746 |
|---|
| Symbol | |
|---|
| ID | 5732469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 851392 |
|---|
| End bp | 852141 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641277876 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001543522 |
|---|
| Protein GI | 159897275 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0459105 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGGAA TGCAAGACCA TGTGGCGATT GTCACCGGAG CATCGCGCGG GATTGGCCGC
GCAATTGCTT TGGAGCTAGC CAGTTGGGGC GTTAAAGTCG TTGTTAATTA TCAATCAAGT
GCCGCCAAAG CTGAGGCAGT GGTTGCCGAA ATTCAAGCCG CTGGGGGAGT GGCGATGGCA
ATTCAGGCCG ACGTAACCGA TCAGCAAGCG GTTGAAACCA TGGTTACTCA AACCTTGGCT
GAGTGGGGTA CGATTCAGAT TTTGATCAAT AATGCAGGCA TCACCCGCGA TAATCTCTTT
CAGCGCTTGA AAGACGAAGA GTGGGACGAT GTGATCAAGG CTGATCTGAC CTCGGCATTT
TTATGCACGC AGGCGGTGTT GCCAGCGATG CGAGCTAATA GTTATGGCCG AATCGTCAGC
ATTGCTTCGT TGGCGGGCTT GGCGGGCAAT GTTGGTCAAA CCAACTATGC AGCGGCCAAA
ATGGGCTTGG TTGGTTTTTC CAAGGCTGTG GCACGCGAAG TCACTTCTGA TGGAATTGTG
GTGAATGTGG TTGCACCTGG CTATATCGAC ACCGATTTTA TCGACCATAT TCCGCAATGG
CTGCGAACCT GGGCGCTTGA TGTGATTCCG CTCAAACGCT TTGGCAAAGT TGAAGAAGTT
GCGCCAGCGG TGGCCTTTCT GGCATCGCCT GCTGCATCGT ATATTATTGG CCATGTGCTG
ACGATTGACG GCGGCTGGGT CATGCCATAG
|
|---|
| Protein sequence | MRGMQDHVAI VTGASRGIGR AIALELASWG VKVVVNYQSS AAKAEAVVAE IQAAGGVAMA
IQADVTDQQA VETMVTQTLA EWGTIQILIN NAGITRDNLF QRLKDEEWDD VIKADLTSAF
LCTQAVLPAM RANSYGRIVS IASLAGLAGN VGQTNYAAAK MGLVGFSKAV AREVTSDGIV
VNVVAPGYID TDFIDHIPQW LRTWALDVIP LKRFGKVEEV APAVAFLASP AASYIIGHVL
TIDGGWVMP
|
|---|
| |