Gene Haur_0710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0710 
Symbol 
ID5732625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp816580 
End bp817302 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content51% 
IMG OID641277840 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001543486 
Protein GI159897239 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTAA TTCGCGTTCT TATCATTGAT GATCATCCAC TTTTTCGCCA AGGCATCTGC 
TGGAGCCTCG GCCAAGAAAA AGATATCGAG GTGATCGGCC AAGCTGAAAA TGGCGCTGAG
GCCATTAAGC TCACTGAAAC CCTCAGCCCT AATGTTGTGT TGCTAGATAT TAATTTGCCA
GGCTTGAATG GCTTGGAAGT TGCTCGCGTG CTCAAACGCC GAGCTCCACG CATGGGCATC
ATTGTGTTGA GTATTCACGA CGATGATGAG CAATTGTTCA ACGCCATCAA GGCTGGCGCT
GCTGCTTACG CTTCCAAGGA AATCGATCCC ACGCAGCTGG TGGGCATGAT TCGCGATGTT
GCCCATGGCC GCTATGTGAT CAACGAAAGC GTCATGTCAA AGCCGCATGT GGCCACCCGC
GTGCTCAACC AATTCCGCGA GCTTTCTAAC GTGGCTAACA ACAGCGAAGA TACCTCGTCG
ATGTTTGCGC CATTGACCAG CCGCGAAATT GAAATTCTCG ATTGTATTGC CCGTGGCCTT
TCCAACAAAG AAATCGCCAA TCAGCTGTCG ATCAGCGGCC AAACCGTCAA AAACCACATC
ACCTCAATTC TTAGCAAGCT CCAAGTCAAC GATCGCACGA TGGCCGTTAT TCACGCTATT
CAACAAGGCT GGATCAAACT AGGCTATGAT GAAAGTCGCG AAAGCCGCAG CCGCACCGCT
TGA
 
Protein sequence
MELIRVLIID DHPLFRQGIC WSLGQEKDIE VIGQAENGAE AIKLTETLSP NVVLLDINLP 
GLNGLEVARV LKRRAPRMGI IVLSIHDDDE QLFNAIKAGA AAYASKEIDP TQLVGMIRDV
AHGRYVINES VMSKPHVATR VLNQFRELSN VANNSEDTSS MFAPLTSREI EILDCIARGL
SNKEIANQLS ISGQTVKNHI TSILSKLQVN DRTMAVIHAI QQGWIKLGYD ESRESRSRTA