Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0710 |
Symbol | |
ID | 5732625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 816580 |
End bp | 817302 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641277840 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001543486 |
Protein GI | 159897239 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCTAA TTCGCGTTCT TATCATTGAT GATCATCCAC TTTTTCGCCA AGGCATCTGC TGGAGCCTCG GCCAAGAAAA AGATATCGAG GTGATCGGCC AAGCTGAAAA TGGCGCTGAG GCCATTAAGC TCACTGAAAC CCTCAGCCCT AATGTTGTGT TGCTAGATAT TAATTTGCCA GGCTTGAATG GCTTGGAAGT TGCTCGCGTG CTCAAACGCC GAGCTCCACG CATGGGCATC ATTGTGTTGA GTATTCACGA CGATGATGAG CAATTGTTCA ACGCCATCAA GGCTGGCGCT GCTGCTTACG CTTCCAAGGA AATCGATCCC ACGCAGCTGG TGGGCATGAT TCGCGATGTT GCCCATGGCC GCTATGTGAT CAACGAAAGC GTCATGTCAA AGCCGCATGT GGCCACCCGC GTGCTCAACC AATTCCGCGA GCTTTCTAAC GTGGCTAACA ACAGCGAAGA TACCTCGTCG ATGTTTGCGC CATTGACCAG CCGCGAAATT GAAATTCTCG ATTGTATTGC CCGTGGCCTT TCCAACAAAG AAATCGCCAA TCAGCTGTCG ATCAGCGGCC AAACCGTCAA AAACCACATC ACCTCAATTC TTAGCAAGCT CCAAGTCAAC GATCGCACGA TGGCCGTTAT TCACGCTATT CAACAAGGCT GGATCAAACT AGGCTATGAT GAAAGTCGCG AAAGCCGCAG CCGCACCGCT TGA
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Protein sequence | MELIRVLIID DHPLFRQGIC WSLGQEKDIE VIGQAENGAE AIKLTETLSP NVVLLDINLP GLNGLEVARV LKRRAPRMGI IVLSIHDDDE QLFNAIKAGA AAYASKEIDP TQLVGMIRDV AHGRYVINES VMSKPHVATR VLNQFRELSN VANNSEDTSS MFAPLTSREI EILDCIARGL SNKEIANQLS ISGQTVKNHI TSILSKLQVN DRTMAVIHAI QQGWIKLGYD ESRESRSRTA
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