| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0627 |
|---|
| Symbol | |
|---|
| ID | 5732525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 722245 |
|---|
| End bp | 723162 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641277754 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001543403 |
|---|
| Protein GI | 159897156 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGGA CAATGCGGGT CACATTTTGG GGTGTTCGGG GTAGCTATCC GGTTCCCGGG
TCGGATACTG TGGGGTTTGG CGGCAATACA CCATGTGTCG AAGTCGAGGC CAATGGGCAT
ACGATTATTC TCGATGCGGG GACGGGAATT GTGCGCCTCG GTAATGATCT GTTGCGACGA
GCCAAAGAGC GTGGTGGACC AGTACGGGCA ACCTTGCTAT TTAGCCATAT GCACCATGAT
CATACCCAAG GCTTTCCATT CTTTACTCCA GCCTATGTTG GCTCAAGTAT TTTGAATATT
TTTGGGCCAC GGGTATTCGA GCGTGATCTT GAAGAAACTT TGGCACATTC AATGTTGCCA
CCAAGTTTTC CGGTGTCGTT GGGCGAAATG AACTCACTGA AGTTTATGCG CAACATGACC
GAGACCGATG TATTGCTGTT TGATGCCAAT CAAGATACGG TGACGGTCAA GAATTTCTAC
CACGATCAAA TTACTGATGA TCCTGATGTG GTGCAGATTC GGGCCATGCG TTCGTATGCG
CACCCCGAAG GTGTGTTTAT CTATCGGGTG CAATGGCAGG GCAAGAGTGT GGTCTATGCG
ACCGACACCG AAGGCTATGT CAATACTGAT CAGCGCTTGG CAGCGTTTGC CAACCAAACC
GACTTGTTGA TCCACGATGC TCAATATAGT GAAGCGCATT ATCTCGGCCA TGCCGGTTAT
AACGCAACCC AAGGTTGGGG CCACTCTACG CCGCAGATGG CGTGTGCTGT GGCCATGGCT
GCGCAGGCCA AACGCCTCGT CTTGTTCCAT CACGAGCCAC GCTACAACGA TGCAATGATT
CGTGAGTTGG AGCAGGCTTC GCAGGCGATT TTTGCCAACA CCACTGCCGC CTACGAAGGC
TTAACAATCG AAATCTAA
|
|---|
| Protein sequence | MAGTMRVTFW GVRGSYPVPG SDTVGFGGNT PCVEVEANGH TIILDAGTGI VRLGNDLLRR
AKERGGPVRA TLLFSHMHHD HTQGFPFFTP AYVGSSILNI FGPRVFERDL EETLAHSMLP
PSFPVSLGEM NSLKFMRNMT ETDVLLFDAN QDTVTVKNFY HDQITDDPDV VQIRAMRSYA
HPEGVFIYRV QWQGKSVVYA TDTEGYVNTD QRLAAFANQT DLLIHDAQYS EAHYLGHAGY
NATQGWGHST PQMACAVAMA AQAKRLVLFH HEPRYNDAMI RELEQASQAI FANTTAAYEG
LTIEI
|
|---|
| |