Gene Haur_0594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0594 
Symbol 
ID5732492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp684201 
End bp686843 
Gene Length2643 bp 
Protein Length880 aa 
Translation table11 
GC content51% 
IMG OID641277721 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001543370 
Protein GI159897123 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase
[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.333457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCAC AACCACGAAA TGTTCGGTTT GGGGTTCAAG CGCGGGTTTT GTTGCTGGCA 
TTAGGGGTTT CGCTGCCAGC CTTGATTATT GTGGGCTGGT TGAGCTTGAA TGGGATTTCC
CAAGCCCGCT TGGCCGCCGT CAAACAAAGC GAAAACACCC TCTTAATTCA AGCTGAAAAC
ATGCTGATGA GTCGCGCAAT CGACAAAGCT GAGCTATATG ATCAGGCTTT GTTGAGTGTG
CAGCGCCAAG TCCAAACCAT GGTTAATATC ACCCAACAGG CCTTCAGCCG CCCACTTGAT
CGGCTGGCCG ACACTCGCCC CGACCCCTTT TGGCTGGCAG GCAGTGGCCC AACCCTGATT
CCCCCTGATC AACTGCGGCT GACCGTGGCT CGTGCTCGCC AAATTACTGG CGCACTCCAA
AGCAACGTCG ATCTGAATCC GCTGATTTCT TTGGGCTATT TGGCCACCAA AGAAGGTGTG
ATGGTGCTCG ATGATGTGCG GGTCGTTAGC GTATTGCCCG ATGGTTTTGA TGCCCGTAAA
CGTCCTTGGT ATCAAGCCGC CGAAAAAGCT ACTGGCCCAA CTTGGGTCGG AACCTATGTC
GATGCCGTCA CCAACCAGCT CAATATCACG GTCTCGGCTC CGGTCAAAGT CAACAATCAG
TTGATTGGCG TGATTGGCAT GGATTTGCTG CTGACCACGA TTCAATCGGA TGTGTTGCGG
ATCGATGCAG GCAGTTCGGG CTATGCTTTT GTGATGGATC ACGATGGCAA TATTTTGATT
CGGCCTGAGC TTGAGGCTGG CAATACCCGT TGGGACGAAA CCTTTAAGAA ACAGAATTTA
TTTGAGAGCA ACGACCCAAA TTTTGTCTCA TTACGCGAAA ATATTCGCAA TGATATGGCT
GGCGTGACCC GCCTGCAACT CGATGGTGGC GACCGCTATC TGGCCTATTC GCCGATGCGC
ACGGTTGGCT GGGTCGTGGC CTTGGTGCTG CCAATCGACG ATGTGATTAG CCCAGCCCGC
GATGCGAGTT TGGCAATCGA ACGCGAGCAA GAGCAGCTAC GTCGCAATTT CTTGGCAGTT
TTGTTGATCA CCTCAGGCTT AATTATTATT TTGGCCACAG GCTTGGCGCG AACGATCATT
CGACCATTGC GCGACCTTGA AGTTGGCGCA CAACGAATCG CCTCAGGCCA GCTTGATCAA
GAGTTGGTCG TCCATGGCAA TGATGAAATT GGCCGCTTGA GCCTTTCGTT CAATCAGATG
ACTACAGCGT TACGCGAAAA AGTCGATGCC TTAGAAGTTA ATGCCCAACA GATGGCCGCG
ATCAATGAAA CCAGCAATGA ACTCAAACGC TTGCGTTCAT TAAATACCGT GCTTGATCAT
ATTCCGCAAT TATTATGTCA ACGCTTAGGG TTTGATCGGG CGGTGCTGTA TCTGCTGCGT
GATGAGGTGA TCGAGGTAGT TTCGGCCTCA TTTGGACCCA ACAACTACGA GCTTGAATAC
GATTTTATGC GGGCAGCGCT GTCCGAGCCA ATTACAATCG ATAGCGATAC GATTGAAGCC
AGCGTAATCA AATCGCGCCA AGCGGTGATC GTCGATAATC CTTGGGAACA TCCGCAGGTA
ATTCAAGCCA AGCAGTTTAT TTCGGGCGGC GATTCGTATG TACAAGCGCC AATTTTGGGC
CGCGAAAAAG TATTGGGCTT GATTTCTGCC GATTACTATG AGCAAGGGCG TTTGGTTACG
GTGCAAGATG CAGCGTTACT GCTCAACTTT GCTGATATGG TCGGCTTGAC AATTGAAAAC
GCCTTCTCAT TCCAAAACTT GGAAGATTTG GTGGCCCAAC GCACTGGCGA GTTGCGCGAA
GCTCTCGACC GTGCTCAAGC CGCTGATCGC CTGAAATCGC AGTTTTTGGC CAGCATTTCA
CACGAATTAC GCACGCCACT GAACGCAATC ATTGGCTTCT CAACCGTGTT GCTCGATGAA
CTTTCGCCCT TGTTGGTTGA AGAACAGCGC GAAGACCTTG AAACCATCAA CAAAAATGGC
CGCTACTTGC TCGATCTGAT CAACGATATT TTGGATATGG CGCGGATCGA AGCTGGCAAA
TTTGCCCTGC ATCGTGAGGC AACGGCAGTG CTGCCAGTCG TGCAATCGGC AGTCGATATT
ATGCATGGTC TGAATTCCAA GCCAGTTACC ATGCGCATCG ATATTGCGCC CGATTTGCCA
CGAATGGATG TTGATCCAAC CCGTTTGCGC CAAATTGTGA TTAACCTGAT TTCAAATGCG
GTAAAATTTA CCGACCGTGG CCAAATTGTG GTGCGGGCAA TTCGGCGGGT AGTCCAAGAA
GCTACGCCAA TTGGCTCACA CTATTTATTG CCCGGCGATT GGATTGTAAT CAGCGTCCAA
GATACGGGGA TCGGCATGGA TGCCGAAGCC TTGGGCAAGC TGTTCCAAGA GTTTCAGCAA
GTGCATGCTG GGGCACGCGG CATTTTGGGG TCGGGCTTGG GGCTTTCGAT TACCCGCAGG
TTGGTCGATT TGCACGATGG TGATTTATGG GTCGATAGCA AAGTTGGGGT TGGTAGCACC
TTCTCATTTG CGATCGCCAC CGCCAGCATC CCAGCGCCGA TTGAACAACA ATCACCTAGT
TAG
 
Protein sequence
MTSQPRNVRF GVQARVLLLA LGVSLPALII VGWLSLNGIS QARLAAVKQS ENTLLIQAEN 
MLMSRAIDKA ELYDQALLSV QRQVQTMVNI TQQAFSRPLD RLADTRPDPF WLAGSGPTLI
PPDQLRLTVA RARQITGALQ SNVDLNPLIS LGYLATKEGV MVLDDVRVVS VLPDGFDARK
RPWYQAAEKA TGPTWVGTYV DAVTNQLNIT VSAPVKVNNQ LIGVIGMDLL LTTIQSDVLR
IDAGSSGYAF VMDHDGNILI RPELEAGNTR WDETFKKQNL FESNDPNFVS LRENIRNDMA
GVTRLQLDGG DRYLAYSPMR TVGWVVALVL PIDDVISPAR DASLAIEREQ EQLRRNFLAV
LLITSGLIII LATGLARTII RPLRDLEVGA QRIASGQLDQ ELVVHGNDEI GRLSLSFNQM
TTALREKVDA LEVNAQQMAA INETSNELKR LRSLNTVLDH IPQLLCQRLG FDRAVLYLLR
DEVIEVVSAS FGPNNYELEY DFMRAALSEP ITIDSDTIEA SVIKSRQAVI VDNPWEHPQV
IQAKQFISGG DSYVQAPILG REKVLGLISA DYYEQGRLVT VQDAALLLNF ADMVGLTIEN
AFSFQNLEDL VAQRTGELRE ALDRAQAADR LKSQFLASIS HELRTPLNAI IGFSTVLLDE
LSPLLVEEQR EDLETINKNG RYLLDLINDI LDMARIEAGK FALHREATAV LPVVQSAVDI
MHGLNSKPVT MRIDIAPDLP RMDVDPTRLR QIVINLISNA VKFTDRGQIV VRAIRRVVQE
ATPIGSHYLL PGDWIVISVQ DTGIGMDAEA LGKLFQEFQQ VHAGARGILG SGLGLSITRR
LVDLHDGDLW VDSKVGVGST FSFAIATASI PAPIEQQSPS