Gene Haur_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0546 
Symbol 
ID5732280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp635451 
End bp637577 
Gene Length2127 bp 
Protein Length708 aa 
Translation table11 
GC content39% 
IMG OID641277673 
ProductATP-dependent OLD family endonuclease 
Protein accessionYP_001543322 
Protein GI159897075 
COG category[L] Replication, recombination and repair 
COG ID[COG3593] Predicted ATP-dependent endonuclease of the OLD family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAA CCGACGTGAT CATCAAGAAC TTTCGCAGTA TTGAACACGC CCAGCTGAAC 
GGCTGTGGGG ATATCAATGT CCTGATTGGC AAGAATAATG CGGGGAAGTC GAATATCCTC
TTGGCGATTA CGACGTTTTT CGAGTTTATG GAGCGAGGCA AACTATTCAC ATTTATTGAA
GATTCCAAAG ATACAATAAA TTTTTTCAAT AATAGTGAAG ATTCAATAAT CGAAATCAGC
ATAAAGTTCA ATATTTCTCA ATCAGACATA GATAACTTAA AAATATATAA GCCTGAAAAT
AATACAAAAA ATACATACAC AAAATTAAGT ATTACTATAG TAAATTTATT AGACAAAAAA
TCAAAAGTTA ATGCAAAAAT ATTAAAAAAT ATAACCTTGG AAGGTGACAA AAGTAATCAT
GAATTACTAG ATATAATCAA TAATAATTTA TCTAATTTAG TACAATATCA TATTATACTA
AATTACATAT CCTCCGAAAC ATTAATATTA AATGAAATAA AAGAAAAAAA TAAATCAGGA
TTTGAGCAAG CAATTTCAAT GTTAAATAAT ATTATCAAAT CAAATAATAG AGAACACTTT
AATGACATAA AGAAAGGAGC AAAAAATCAA GAATTACTCG ATAATCTAAT AGAAGAGAGA
ATTAAATCAA ACAATAATGA TGAATTATCT GTAATAGAAG GAATATTGAA TACAACTAAG
CACAGTAATA TCGATTTAGA AAAATTAATT TTATCCCTAA AAGAAATAGT ACAAAGAATA
TCGAACCATT TTCATCATAT TAAAGAGCGA AGGCCGGAAT TAGATATTAA TGACGCAAAC
GTGTTCTTAG AATTAAAAAA GAAAAAAGCA AGCAAGGCTA CATTGCAACG AATCCAAACC
ATAGCAAATA TGGTATTAGG TATTACTATT GATGCCTTTG TCGAAGATGA TAATAGCGAT
CCCGTTTTGG ATGTTGATAA CTTCCTTATC CAAGTGAATG GCTATGGGGT TAAGGAAGCC
TTGCGAATCA TCTTTGATTA TGAGATTCAT CGACCAAAGG TGGTATTAAT CGAAGAACCA
GAATTGCACC TGCATCCGTC CCTTGAAATG AATCTCATGC GCTACCTCAA GGAGATTAGC
GCCGAGTGCC AGATCTTTAT GACAACCCAT TCCACCAACT TTATTGACAC CGGTGATGTC
AAAAATGTGT ATCTCGTATC AAAAAACGAA TCAACCACCG TGCGAGCACT CAATACTGAA
GAGGCTGCCA GTCTTATTCC ACAAGAACTC GGTTTACGTC TCAGCTCGCT ATTTATGTAC
GACAAGCTTA TTTTCGTTGA GGGCAAGCTT GATGAGGAGA TACTACGGAC ATGGACTGCG
ACGCTTGGCG TGAATTTAAG CCAACACAAT ATTGGCTTTG TCACCATGGA AGGCGTTTTC
AATCAAACCT ATTATGCTGC TGAAGCAACC CTTGATTTCT TGAGTAAAAA ACAGATTCAG
ACGTGGTTCT TAATTGATCG TGACGAGCGG GATCAACAGC AGATTGATCG TATTAAACAA
CCCTTATCGG GGAAATCGAA TGTAAGGGTA CTCAACAAAC GGGAAATCGA AAACTATCTC
TTTGTGCCAC GCGCCATTGC CCAGTTCTTA CGTGACAAAG GCCAAATATC AGGACTGCAA
GCAACAACGG AAGGCATTAC AGAAGAAATG ATCCAGCAGC AGATCACTAC CTGTGTGGAA
ACATGCAAAC AGCAGGTCAT TGAGAAGCGT ATCGCTGCAC GCCTGCCAGC TCTGCGCTTT
GATCGCGAGG TATTGTTCCC CAAAAAGCCA AAGGCAGGCG ATCTCGTTAG TCGTAGTATA
CAGGAATTGG ATCGGCTGAC AGCCCTACTC AGCGATGCAA AGGCTCAATT CCCAGCCATT
GCCCAAGAGG AAGCATCTGC CATCGAGGCA CGGTGGCCAA CCGAAAAGAT GAATCTCGTT
CAAGGGGATG TCCTGCTCGA TGCGGTCTTT CGGGTCTATG GCCTACGCTT CAACAAGAGT
CGCGATGGAG CTGCGCTGGC GGCATTGATG ACGGACGAGG AGATTGATCA GGAAATCAAA
GCCTTTTTCA AGACGATCAC GCAGTAG
 
Protein sequence
MKITDVIIKN FRSIEHAQLN GCGDINVLIG KNNAGKSNIL LAITTFFEFM ERGKLFTFIE 
DSKDTINFFN NSEDSIIEIS IKFNISQSDI DNLKIYKPEN NTKNTYTKLS ITIVNLLDKK
SKVNAKILKN ITLEGDKSNH ELLDIINNNL SNLVQYHIIL NYISSETLIL NEIKEKNKSG
FEQAISMLNN IIKSNNREHF NDIKKGAKNQ ELLDNLIEER IKSNNNDELS VIEGILNTTK
HSNIDLEKLI LSLKEIVQRI SNHFHHIKER RPELDINDAN VFLELKKKKA SKATLQRIQT
IANMVLGITI DAFVEDDNSD PVLDVDNFLI QVNGYGVKEA LRIIFDYEIH RPKVVLIEEP
ELHLHPSLEM NLMRYLKEIS AECQIFMTTH STNFIDTGDV KNVYLVSKNE STTVRALNTE
EAASLIPQEL GLRLSSLFMY DKLIFVEGKL DEEILRTWTA TLGVNLSQHN IGFVTMEGVF
NQTYYAAEAT LDFLSKKQIQ TWFLIDRDER DQQQIDRIKQ PLSGKSNVRV LNKREIENYL
FVPRAIAQFL RDKGQISGLQ ATTEGITEEM IQQQITTCVE TCKQQVIEKR IAARLPALRF
DREVLFPKKP KAGDLVSRSI QELDRLTALL SDAKAQFPAI AQEEASAIEA RWPTEKMNLV
QGDVLLDAVF RVYGLRFNKS RDGAALAALM TDEEIDQEIK AFFKTITQ