Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0546 |
Symbol | |
ID | 5732280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 635451 |
End bp | 637577 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641277673 |
Product | ATP-dependent OLD family endonuclease |
Protein accession | YP_001543322 |
Protein GI | 159897075 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAA CCGACGTGAT CATCAAGAAC TTTCGCAGTA TTGAACACGC CCAGCTGAAC GGCTGTGGGG ATATCAATGT CCTGATTGGC AAGAATAATG CGGGGAAGTC GAATATCCTC TTGGCGATTA CGACGTTTTT CGAGTTTATG GAGCGAGGCA AACTATTCAC ATTTATTGAA GATTCCAAAG ATACAATAAA TTTTTTCAAT AATAGTGAAG ATTCAATAAT CGAAATCAGC ATAAAGTTCA ATATTTCTCA ATCAGACATA GATAACTTAA AAATATATAA GCCTGAAAAT AATACAAAAA ATACATACAC AAAATTAAGT ATTACTATAG TAAATTTATT AGACAAAAAA TCAAAAGTTA ATGCAAAAAT ATTAAAAAAT ATAACCTTGG AAGGTGACAA AAGTAATCAT GAATTACTAG ATATAATCAA TAATAATTTA TCTAATTTAG TACAATATCA TATTATACTA AATTACATAT CCTCCGAAAC ATTAATATTA AATGAAATAA AAGAAAAAAA TAAATCAGGA TTTGAGCAAG CAATTTCAAT GTTAAATAAT ATTATCAAAT CAAATAATAG AGAACACTTT AATGACATAA AGAAAGGAGC AAAAAATCAA GAATTACTCG ATAATCTAAT AGAAGAGAGA ATTAAATCAA ACAATAATGA TGAATTATCT GTAATAGAAG GAATATTGAA TACAACTAAG CACAGTAATA TCGATTTAGA AAAATTAATT TTATCCCTAA AAGAAATAGT ACAAAGAATA TCGAACCATT TTCATCATAT TAAAGAGCGA AGGCCGGAAT TAGATATTAA TGACGCAAAC GTGTTCTTAG AATTAAAAAA GAAAAAAGCA AGCAAGGCTA CATTGCAACG AATCCAAACC ATAGCAAATA TGGTATTAGG TATTACTATT GATGCCTTTG TCGAAGATGA TAATAGCGAT CCCGTTTTGG ATGTTGATAA CTTCCTTATC CAAGTGAATG GCTATGGGGT TAAGGAAGCC TTGCGAATCA TCTTTGATTA TGAGATTCAT CGACCAAAGG TGGTATTAAT CGAAGAACCA GAATTGCACC TGCATCCGTC CCTTGAAATG AATCTCATGC GCTACCTCAA GGAGATTAGC GCCGAGTGCC AGATCTTTAT GACAACCCAT TCCACCAACT TTATTGACAC CGGTGATGTC AAAAATGTGT ATCTCGTATC AAAAAACGAA TCAACCACCG TGCGAGCACT CAATACTGAA GAGGCTGCCA GTCTTATTCC ACAAGAACTC GGTTTACGTC TCAGCTCGCT ATTTATGTAC GACAAGCTTA TTTTCGTTGA GGGCAAGCTT GATGAGGAGA TACTACGGAC ATGGACTGCG ACGCTTGGCG TGAATTTAAG CCAACACAAT ATTGGCTTTG TCACCATGGA AGGCGTTTTC AATCAAACCT ATTATGCTGC TGAAGCAACC CTTGATTTCT TGAGTAAAAA ACAGATTCAG ACGTGGTTCT TAATTGATCG TGACGAGCGG GATCAACAGC AGATTGATCG TATTAAACAA CCCTTATCGG GGAAATCGAA TGTAAGGGTA CTCAACAAAC GGGAAATCGA AAACTATCTC TTTGTGCCAC GCGCCATTGC CCAGTTCTTA CGTGACAAAG GCCAAATATC AGGACTGCAA GCAACAACGG AAGGCATTAC AGAAGAAATG ATCCAGCAGC AGATCACTAC CTGTGTGGAA ACATGCAAAC AGCAGGTCAT TGAGAAGCGT ATCGCTGCAC GCCTGCCAGC TCTGCGCTTT GATCGCGAGG TATTGTTCCC CAAAAAGCCA AAGGCAGGCG ATCTCGTTAG TCGTAGTATA CAGGAATTGG ATCGGCTGAC AGCCCTACTC AGCGATGCAA AGGCTCAATT CCCAGCCATT GCCCAAGAGG AAGCATCTGC CATCGAGGCA CGGTGGCCAA CCGAAAAGAT GAATCTCGTT CAAGGGGATG TCCTGCTCGA TGCGGTCTTT CGGGTCTATG GCCTACGCTT CAACAAGAGT CGCGATGGAG CTGCGCTGGC GGCATTGATG ACGGACGAGG AGATTGATCA GGAAATCAAA GCCTTTTTCA AGACGATCAC GCAGTAG
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Protein sequence | MKITDVIIKN FRSIEHAQLN GCGDINVLIG KNNAGKSNIL LAITTFFEFM ERGKLFTFIE DSKDTINFFN NSEDSIIEIS IKFNISQSDI DNLKIYKPEN NTKNTYTKLS ITIVNLLDKK SKVNAKILKN ITLEGDKSNH ELLDIINNNL SNLVQYHIIL NYISSETLIL NEIKEKNKSG FEQAISMLNN IIKSNNREHF NDIKKGAKNQ ELLDNLIEER IKSNNNDELS VIEGILNTTK HSNIDLEKLI LSLKEIVQRI SNHFHHIKER RPELDINDAN VFLELKKKKA SKATLQRIQT IANMVLGITI DAFVEDDNSD PVLDVDNFLI QVNGYGVKEA LRIIFDYEIH RPKVVLIEEP ELHLHPSLEM NLMRYLKEIS AECQIFMTTH STNFIDTGDV KNVYLVSKNE STTVRALNTE EAASLIPQEL GLRLSSLFMY DKLIFVEGKL DEEILRTWTA TLGVNLSQHN IGFVTMEGVF NQTYYAAEAT LDFLSKKQIQ TWFLIDRDER DQQQIDRIKQ PLSGKSNVRV LNKREIENYL FVPRAIAQFL RDKGQISGLQ ATTEGITEEM IQQQITTCVE TCKQQVIEKR IAARLPALRF DREVLFPKKP KAGDLVSRSI QELDRLTALL SDAKAQFPAI AQEEASAIEA RWPTEKMNLV QGDVLLDAVF RVYGLRFNKS RDGAALAALM TDEEIDQEIK AFFKTITQ
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