Gene Haur_0451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0451 
Symbol 
ID5732350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp528277 
End bp529215 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content50% 
IMG OID641277577 
Productanti-sigma-factor antagonist 
Protein accessionYP_001543230 
Protein GI159896983 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
[COG2203] FOG: GAF domain 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTAG GATCAGGATC ACAGCTGAAC AATGCTGAAC GAACCGAGAC ATTGCAAGAG 
CTTGGGCTGC TTGATGTTTC TTTCGACCCA GCTTTTGATC GTTTGACCCG CTTAGCAAGC
AAGGTTTTGC AAGCACCAGT GTCGTTACTT TCGCTCGTTG AACATCATCG GCAATATTTT
AAAAGCCATA TTGGGTTGGC TGAGCCATGG GCCGAGCGCC GCGAAACCCC ATTAACCCAT
TCGTTTTGCC AACATGTGGT CAGCAATGGT CAAGAATTAA TTGTGACCGA TGCCCGCGAA
CATCCCTTAG TTCACGATAA TTTGGCTATC CCCGATTTGG GCGTGATTAG CTATGCAGGT
ATGCCGATTC GCAGCGGTGG CCATGTACTT GGCTCGTTCT GTGTGATCGA TGGCAAGCCC
CGGGTTTGGA CGGCTGATGA ACTGGATATT CTGCATGAAT TTGCTGAATT GTTGATGACC
GAACTCAAAC TACGCCAAGA AATTCGTATC CACCAACAGG ATATTCGCGA GCGGGAGCGC
TTGCAAAACG AGTTGATCGG CTTGCAACAA GCCTTGCTCG ATGAGCTTTC AACCCCGCTG
ATTCCTTTAA ATGATCAGGT ATTGGTCGTT CCATTGATTG GAGCGCTCGA TCAGCAGCGT
GCGCAACGGA TGACCGAGGC GCTATTAACT GGTGTCGGTA AATATCGCGC TGATTTTGTG
ATTCTCGATA TTACTGGTGT GCCCGTGCTC GATACCTATG TGGCATCGTT GTTGGTGCAA
ACCTCGCAAG CAATTCAACT GCTCGGTGCG CGAATGGTAT TAACGGGTTT GCGCCCCGAA
ATTGCCCAAA CCATCGTCAG CGTTGGCCTC GATTTGCGTA GCGTTGTGAC CTATAGCACG
CTGCAACAGG GCATCGAATA TACCTTTCGG CGTAAATAA
 
Protein sequence
MSLGSGSQLN NAERTETLQE LGLLDVSFDP AFDRLTRLAS KVLQAPVSLL SLVEHHRQYF 
KSHIGLAEPW AERRETPLTH SFCQHVVSNG QELIVTDARE HPLVHDNLAI PDLGVISYAG
MPIRSGGHVL GSFCVIDGKP RVWTADELDI LHEFAELLMT ELKLRQEIRI HQQDIRERER
LQNELIGLQQ ALLDELSTPL IPLNDQVLVV PLIGALDQQR AQRMTEALLT GVGKYRADFV
ILDITGVPVL DTYVASLLVQ TSQAIQLLGA RMVLTGLRPE IAQTIVSVGL DLRSVVTYST
LQQGIEYTFR RK