Gene Haur_0434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0434 
Symbol 
ID5732333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp506962 
End bp507972 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content46% 
IMG OID641277560 
ProductABC transporter related 
Protein accessionYP_001543213 
Protein GI159896966 
COG category[R] General function prediction only 
COG ID[COG4586] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCAGTTA TTGATGTTCG TAATTTGGGC AAAACCTACC GCACCATTGA AAAAGAAGGC 
GGAGTCAAAG GGGCGATCAA GGCGCTCTTT CGGCCTCAAT ATCGCGAAAA AGTGGCAGTT
CACGATTTGA ATTTTCAAAT CGATGCTGGC GAAATTGTCG GCTATATTGG AGTCAATGGC
GCTGGCAAAT CGACCACAAT CAAAATGTTG ACGGGAATTC TCTACCCTAC GACTGGCGCT
GTTACAGTTT TGGGTCACGA TCCGCAGCGT GAGCGGGTGG CTAATGCGCG TAATATTGGG
GTCGTGTTTG GTCAGCGTAG CCAGTTATGG TGGGATTTAG CGCTGATCGA ATCACTCAAT
TTGGTTGCCA ATATTTATGA AGTCGAGCCA AGCCGCTATA AGCAATTGCT CAGCCATTTC
AGCGAGGTCT TAGAGCTTGA CGAAATTTTA AAAACGCCGA TTCGCTCGAT GTCGCTCGGC
CAGAAAATGC GAGCCGAACT AGCGGCAGCC TTCATTCACG AACCCAAAAT TGTGTATCTT
GATGAGCCGA CGATCGGGCT TGATGTCATG GTCAAACAGC GGATTCGCGA ATTTATTAAA
GATTACAACC AAACGCATAA TACGACGGTG ATGCTTACGA CCCACGATTT AGGTGATATC
GAGCAGCTTT GTTCGCGGGT GATCATCATT GATGCTGGCA GCAAAGTCTA CGATGGGCCG
TTGCATGCCA TCAAGCAACA ATTTGGCAAA TATCGCACAA TTACCTTTGA AACCAACCAA
CCAATTACCA ATGTGCAATT GCCACCAGCC TGCGAGCAAT TAAGTTTGAG CGAATATAGC
CTTGAATTGA AGTTTGATCG CAGCCAATTA AGTGCCAGCC AAGTAGCCAC AGCCTTGATG
CAGCAAATAG ATGTGGCCGA TTTTACCTTG AATGAGCCTG ATCTTGAGAG TATCATCAAA
CATTTATATC AAAACCCCAC AGCCTATAAC GAGGTAGCAG TTAATGAATA A
 
Protein sequence
MSVIDVRNLG KTYRTIEKEG GVKGAIKALF RPQYREKVAV HDLNFQIDAG EIVGYIGVNG 
AGKSTTIKML TGILYPTTGA VTVLGHDPQR ERVANARNIG VVFGQRSQLW WDLALIESLN
LVANIYEVEP SRYKQLLSHF SEVLELDEIL KTPIRSMSLG QKMRAELAAA FIHEPKIVYL
DEPTIGLDVM VKQRIREFIK DYNQTHNTTV MLTTHDLGDI EQLCSRVIII DAGSKVYDGP
LHAIKQQFGK YRTITFETNQ PITNVQLPPA CEQLSLSEYS LELKFDRSQL SASQVATALM
QQIDVADFTL NEPDLESIIK HLYQNPTAYN EVAVNE