| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0357 |
|---|
| Symbol | |
|---|
| ID | 5732267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 426820 |
|---|
| End bp | 427527 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641277480 |
|---|
| Product | regulatory protein GntR HTH |
|---|
| Protein accession | YP_001543136 |
|---|
| Protein GI | 159896889 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02812] fatty acid metabolism transcriptional regulator FadR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000241267 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAT TACAACGACC AGCATCGTAT TGCGAACAAC AATTGATCAA ACGAATTATT
GGTGGTAGTT ATGCCGCAGG TAGCAGCCTG CCCAGCGAAC GTGAGCTAGC AGTCCAGTTG
GGAGTCACGC GGCCAACCCT GCGCGAAGCG ATTCAACGCT TGGCTCGCGA TGGCTGGCTT
GTCGTGCAAC AAGGCAAGCC GACAATGGTT TGCAATATTT GGCATGATGG CGGCTTGGGC
GTATTGCGCA GTTTGGTGCA ATATAGCACT GAGCTGCCAG CCCAAATTGT GCCGCAACTA
CTAGCGGTGC GCCTCGATTT AGCGCCAAGT TACACCGCCA TGGCGATCGA ACATCACGCC
GAAGCGATTG CGGCCTTATT ACAAACCGCC CTGCCATTGG CTGATAACGC GGCGGCCTAC
GCTCAATTCG ATTGGCAATT ACAGCATCAA TTAACGATCG CTTCGACAAA CCCAATTTAT
ACCTTGATTT TAAATGGCTT TCGTGGCTTC TACCAAATGA TGGCCTTGGA TTATTTTGAG
CTAGCGCAGG CCCGCGAACA TTCGGCGGCC TTTTATCGCA CCCTGTTACA AGCTGCCCAA
ACTCGCGATG CCGATTTAGC TCGCCAAGCC AGCCAATTCG CCATGCAGCA GAGCATCGAA
GTTTGGCAAT TGTTAGCCGC GAATATCAAT AATACACAAA GGGGATAA
|
|---|
| Protein sequence | MSELQRPASY CEQQLIKRII GGSYAAGSSL PSERELAVQL GVTRPTLREA IQRLARDGWL
VVQQGKPTMV CNIWHDGGLG VLRSLVQYST ELPAQIVPQL LAVRLDLAPS YTAMAIEHHA
EAIAALLQTA LPLADNAAAY AQFDWQLQHQ LTIASTNPIY TLILNGFRGF YQMMALDYFE
LAQAREHSAA FYRTLLQAAQ TRDADLARQA SQFAMQQSIE VWQLLAANIN NTQRG
|
|---|
| |