Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0334 |
Symbol | |
ID | 5732244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 398622 |
End bp | 399461 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641277458 |
Product | patatin |
Protein accession | YP_001543114 |
Protein GI | 159896867 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.976534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACGGA CGATTGGTTT ATGTCTTGGT GGCGGGGGTG GCAAGGGCAG TGCCCATATT GGCGTGCTCC ATGAATTAGA ACGGGTTGGC ATCCAAGCAA ATATGGTGGC TGGAACCAGC ATTGGGGCCA TTATTGGGGC CGTGGTGGCG GCAGGCTACA ATGCGACGAC GATTGAGCAG GCTTTTCGTG CCACGCCGTT GCGCCGAATT CTCAGCCTTG ATCCAGCAAG TTGGGGCTTG ATTGGCTCGG AAAAATTGGC TGGCGTGCTC AGCGAATTAT TGGGCGATCA ACTGATCGAA GATTTGCCGA TACCCTATGC GGCAGTGGCG GTTGATTTGG TGACTGGGCA TGAGGTGGTA TTGCAACGTG GCTCGTTGGT TGAGGCTGCC TTGGCGAGTG CGGCAGTGCC TGGGGTGTTT CCGCCCCGCC GCATCGAGAA ATATATTTTG GCCGATGGTG GCATCCGTAA TAATTTGCCA ATTGACATCA CTCGTCAACT TGGAGCCGAA CGGGTGATTG CAGTTAATTT GATTGGTGAA TTCGATCAAT TTGAGGTAAA TAATGCCGCC CAAAGCAGCC TCTTTTCGTG GCGACGCTGG GTTCCGCTCA CGCAATTGGC CTTAGCTGAG CGAGCAATTG GGATTATGGT GCATCAAATT ACTTTGCAAC GTTTGCGCGA AACCCCGCCT GATCTACTCT TCAGCCCCGA TGTAAATCGC ATGAGTATGG CCGATTTACT GCACCTTGAT GATGGAATTC AAGCGGGGAT TGCCTGTGTT GCTGATTATT ATGAAGAATT GCAACAATGG GCGCTTTGGC AGCGCGGCGA ATTTGCCTAA
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Protein sequence | MQRTIGLCLG GGGGKGSAHI GVLHELERVG IQANMVAGTS IGAIIGAVVA AGYNATTIEQ AFRATPLRRI LSLDPASWGL IGSEKLAGVL SELLGDQLIE DLPIPYAAVA VDLVTGHEVV LQRGSLVEAA LASAAVPGVF PPRRIEKYIL ADGGIRNNLP IDITRQLGAE RVIAVNLIGE FDQFEVNNAA QSSLFSWRRW VPLTQLALAE RAIGIMVHQI TLQRLRETPP DLLFSPDVNR MSMADLLHLD DGIQAGIACV ADYYEELQQW ALWQRGEFA
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