| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0233 |
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| Symbol | |
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| ID | 5732128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 268899 |
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| End bp | 269627 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641277357 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001543013 |
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| Protein GI | 159896766 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCGACA AGGAAAAGAA GGGTTTGTTT GGTAATTTGG CTGATCAAAT GAAGGATGCA
ATTGAGCAAA GCCGCGAGAG TGCCGAAGCC AAGCCCACTG CCCCAGCCCC TGGTAACGTG
ATTGGCCAAA TGATGGAGCG CTTGCACGAT ATTCAAGAGA AACAGGAAGA AGCAGCCTCA
TCATCAGTCT CCAATGCAGT AAATGTGATC AAAGATGCTC AAGAAGCAGC CAAAGAAGCT
CGTGAAAAGG CCGAAGCTCA GTCGGCTGCA ACCAACAATG CGGTTGCAGA TGCGTTGCGT
CAAGCTCAAG AAGCTGCCAA AGCCCAAGAA GTCGCTAAAG CCGAGGCTGC CAAAGCCGAA
GCAGCTAAGG CTGAAGCTGC CGCTGAACAA CGCTACACGG TTCAAGGTGG TGATACCTTG
GGCAAAATTT CAGCCCGCTT CTATGGCGAT GCAGCTCAAT GGCGACGAAT TTATGAAGCC
AATCGGGCAA TTATTGGCAA TAATCCCGAT GTGATTAGCG TTGGCCAAGA ATTTGTGATT
CCCGATGCAA GCACCCCACT ACCAGTTCAA CGCACCTATA CTGTGCGGTC TGGTGACACC
ATGCGAGCGA TTGCCCAACG CTTTTATGGC GATGAAATGC AGTGGAAACG AATTTATCAA
GCCAATCGCG ACCGCATTCC CAACCCTGAT GTAATTCACG TCGGCCAAGA ATTTATCATC
CCCGAATAG
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| Protein sequence | MADKEKKGLF GNLADQMKDA IEQSRESAEA KPTAPAPGNV IGQMMERLHD IQEKQEEAAS
SSVSNAVNVI KDAQEAAKEA REKAEAQSAA TNNAVADALR QAQEAAKAQE VAKAEAAKAE
AAKAEAAAEQ RYTVQGGDTL GKISARFYGD AAQWRRIYEA NRAIIGNNPD VISVGQEFVI
PDASTPLPVQ RTYTVRSGDT MRAIAQRFYG DEMQWKRIYQ ANRDRIPNPD VIHVGQEFII
PE
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