Gene Haur_0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0158 
Symbol 
ID5732067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp188932 
End bp189723 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content53% 
IMG OID641277282 
Productimidazole glycerol phosphate synthase subunit HisF 
Protein accessionYP_001542938 
Protein GI159896691 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0107] Imidazoleglycerol-phosphate synthase 
TIGRFAM ID[TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACAC GGCGAATTAT TCCTTGTTTG GATGTGAAGG CTGGGCGTGT AGTCAAGGGC 
ATCAGCTTTC TCAACCATCG CGATGCTGGT GATCCAGTGC AATTAGCAGC CTTCTACAAC
GAATCGGGCG CTGATGAATT GGTGTTTTAC GATATTACCG CTTCATCCGA TGAGCGCAAT
ATTATGGTCG AAGTGGTTGA GAATGTGGCA CGGCAGGTCT TTATTCCGCT AACGGTTGGT
GGTGGCATTC GCACGGTCGA TGATATGTAT CGAATGTTGC GGGCTGGCGC GGATAAAGTT
TCGATCAATA CCGCTGCGGT GCTCAACCCG CAATTAATCG AAGATGGAGC CAAGCGTTTC
GGCTCACAGT GCATTGTGCT TTCGATGGAT GCGCGTCGGA TCAACGAGCC AGGCCAACCC
AGCCAATGGA ATGTTTTCAC CCATACTGGG CGCGATCCAC GGCCAACCGG CTTGGATGCA
ATTGAATGGG CCAAACGAGT GGTCGATTTG GGTGCTGGCG AGTTGGTGAT CAACAGCATG
GATGCCGATG GTACTGGCGC GGGCTACGAT AACGAATTAT TATCGGCGAT TAGCCAGCAA
GTTGGCGTGC CTGTGATTGC CTCTGGTGGT GCTGGCAAGC CCGAACATTT GCTCGCCGCA
TTGCACGAAG GCAAAGCCGA TGCCGTCTTG GCTGCCTCGA TCTTCCACTT TGGCACCTAC
ACGGTCGAAG CCGTCAAAGA ATATTTGGCC AATCAAGGCA TTCCAATGCG CCGCACGCCG
AGGCCTGTAT GA
 
Protein sequence
MLTRRIIPCL DVKAGRVVKG ISFLNHRDAG DPVQLAAFYN ESGADELVFY DITASSDERN 
IMVEVVENVA RQVFIPLTVG GGIRTVDDMY RMLRAGADKV SINTAAVLNP QLIEDGAKRF
GSQCIVLSMD ARRINEPGQP SQWNVFTHTG RDPRPTGLDA IEWAKRVVDL GAGELVINSM
DADGTGAGYD NELLSAISQQ VGVPVIASGG AGKPEHLLAA LHEGKADAVL AASIFHFGTY
TVEAVKEYLA NQGIPMRRTP RPV