Gene Haur_0131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0131 
Symbol 
ID5732026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp162124 
End bp162744 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content50% 
IMG OID641277255 
ProductGTP cyclohydrolase I 
Protein accessionYP_001542911 
Protein GI159896664 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTTA TTTACTCTGG CAATGGACTC AATGGCAACT CAGCACCAGC AGTGCGCGAA 
GATATGGAAG CCGCCGTGCG AACCATTCTC GAAGGTCTCG GCGAGGATGT TGATCGTGAG
GGCTTGCAAC GCACCCCGCA TCGGGTTGCC AAAATGTTTG GCGAGCTGAC CGCTGGTTAT
CATACTGATC CGGTGGCGTT GATTAACGAT GCCATTTTTA CGGTCGAATA TAACGAAATG
GTCTTGGTGC GTGATATTGA ATTTTCGTCG CTGTGCGAAC ATCATATGTT GCCATTTTGG
GGCAAAGCCC ACGTTGCCTA TGTGCCAAAT GGCAAAGTGC TTGGGCTTTC GAAAATTCCA
CGGATTGTTG ATATGTTTGC CAAACGTTTG CAAGTGCAAG AACGCCTAAC CCGCGAAATC
GCCGATTTTG TGGCGCAAAC GATCGATGCA AGCGGCGTAG CAGTGGTGGT ACAGGGTGCG
CATATGTGCT CAATGATTCG TGGCGTTAAA AAGGCCAACG CTCGCATGGT CACGCAATCG
TTGCAAGGTG TGTTTAAAAC CGATCCGCAA ATTCGCGCTG AATTTATGGG TCATATCACG
GCGAATTTTT CCGATGACTA A
 
Protein sequence
MTLIYSGNGL NGNSAPAVRE DMEAAVRTIL EGLGEDVDRE GLQRTPHRVA KMFGELTAGY 
HTDPVALIND AIFTVEYNEM VLVRDIEFSS LCEHHMLPFW GKAHVAYVPN GKVLGLSKIP
RIVDMFAKRL QVQERLTREI ADFVAQTIDA SGVAVVVQGA HMCSMIRGVK KANARMVTQS
LQGVFKTDPQ IRAEFMGHIT ANFSDD