| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0123 |
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| Symbol | rplA |
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| ID | 5732018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 155749 |
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| End bp | 156462 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641277247 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001542903 |
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| Protein GI | 159896656 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.991337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGC AACACGGTAA AAAATACCTG GCTGCTGCGG CAAAAGTAGA AGCAGATCGC
TTGTACACGC CCGAAGAAGC TGCGGCTTTG GTCAAAGAAA CATCGTTCAC CAATTTTGAT
GCAACCGTTG AACTCCACGT GCGCTTGGGT ATCGATCCTC GCCACGCCGA CCAAACGGTG
CGGAGCACTG CTTCGTTGCC CCACGGCACT GGTAAGAGTG TGCGCGTGTT GGTTTTCGCT
CAAGGCGATA CCGAAAACAT CGCTCGCAAT GCTGGCGCTG AAATCGTCGG CGGCGATGAG
TTGATCCAAC GCATCGAAAA AGAAAACTTC ATCGATTTCG ACGTAGCCGT TGCTACCCCC
GACATGATGG GTAAGGTCGG TCGCTTGGGC CGGATTCTCG GTCGCCGTGG CTTGATGCCA
AACCCCAAGA GCGGTACGGT TGTGCCTCCT GGCGATTTGC CCCAAGCGAT CAAGGCTTTG
CAAGGCGGTC GCGTCGAATT CCGCAACGAT AAAACTGGTT TGTTGCACGT TGCCATCGGC
AAAATCAGCT TCACCCCTGA TCAAATCCGC GAAAACTTGG TAGTGTTGTT GGATGCGATC
AAGGCTGCTA AGCCAAGTGG TTCAAAAGGT GTTTACATCA AGAGCCTTAC CCTGACCAGC
ACTATGGGTC CTGGGATTCC GCTCGATGTG AATGTTGCTC AAGCAACTGC CTAA
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| Protein sequence | MAKQHGKKYL AAAAKVEADR LYTPEEAAAL VKETSFTNFD ATVELHVRLG IDPRHADQTV
RSTASLPHGT GKSVRVLVFA QGDTENIARN AGAEIVGGDE LIQRIEKENF IDFDVAVATP
DMMGKVGRLG RILGRRGLMP NPKSGTVVPP GDLPQAIKAL QGGRVEFRND KTGLLHVAIG
KISFTPDQIR ENLVVLLDAI KAAKPSGSKG VYIKSLTLTS TMGPGIPLDV NVAQATA
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