| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0116 |
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| Symbol | |
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| ID | 5732009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 150124 |
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| End bp | 151197 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641277238 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001542896 |
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| Protein GI | 159896649 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00357246 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTGC TACCCGCCGC CATCGACGAT AACGAACTAT CTCCTGCCCG CAAAACCTTG
CTTGATCGCA TCCATTTGGT GTGGATATTT GTCAATGGCT CAACTGCATT AAGCTTGTTT
TTCCTCTTTC TCTTCAATTT CTTTAGCGGC AACAGTGCTT GGGTCCAAAT GTTGATCTTA
TCGATCTCAT CGATTGGCTC AACGGGGATT TTGTGGTATA CCAATAGCAA GCCTGTTCAA
TGGCGTTTAT GGGCAGCCTT GATTAGCTCG ATGGTCGCAT TACTTGAAAT TGCACTTTTC
TTCCAAAATG GCTATTTGAT TGCAATTTCG GTCACGAGTG TGGTCAGTAT CTATGCAGTT
ACCGCTGATC GCCACGAATT AATCACATGG TCGGCAGTGA TTGGCGTGAT TTTTACGATT
ATTTTTGCGA TTTTGAATGG AGTTGAACAA ACTCCGCCAA AATGGCTGAA TGATTTACAC
CTCAACCTGC TAATTTCAAA AGTGTTGGTT CCGGCCTTTA TTGGCGGCGG GATTGTGATG
ATTGCCTTGT TGCTGCTTGG TTTGAGCAAC ACGCTGCGTC AATCACTCAA CGAGGCCAAT
GAGCGCCGCC GAATTGCCGA AGAAGCTCAA GCAGCCCAAG CTAAAACTTT GGCTCAGGTC
GAGCGTCAAG CAGCTGAACA AGCTCGTTTG CTTGAATTGG TGCGCGACCT CGAAACGCCA
GTTATTCCAG TGCTCGATGG TGTGTTGGTG TTGCCAATCG TTGGTCACCT CGAAAGCAAA
CGGCTGGAAA ATTTGACCGA ATTGCTGCTG AATCGAGTTT CACAAGAGCG TGCCCACACG
GTGTTGCTGG ATATCACAGC GGTTTCAGTG GTTGATACGG CTACTGCTCA GCACTTAATT
CAACTAGCCC GCGCAATTCG TTTGCTGGGC GCTGAATGTG TGATTACCGG GATTCGCGCT
CATGTTGCGA GCACCTTGGT GGCACTGGGG ATTACTTGGG AAGGCCTGCG CACCGCTGGC
TCGTTGCGTG ATGGAATTGC CAAAATTATC GCTGAAAAGA ATATTGCAAT TTAG
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| Protein sequence | MSLLPAAIDD NELSPARKTL LDRIHLVWIF VNGSTALSLF FLFLFNFFSG NSAWVQMLIL
SISSIGSTGI LWYTNSKPVQ WRLWAALISS MVALLEIALF FQNGYLIAIS VTSVVSIYAV
TADRHELITW SAVIGVIFTI IFAILNGVEQ TPPKWLNDLH LNLLISKVLV PAFIGGGIVM
IALLLLGLSN TLRQSLNEAN ERRRIAEEAQ AAQAKTLAQV ERQAAEQARL LELVRDLETP
VIPVLDGVLV LPIVGHLESK RLENLTELLL NRVSQERAHT VLLDITAVSV VDTATAQHLI
QLARAIRLLG AECVITGIRA HVASTLVALG ITWEGLRTAG SLRDGIAKII AEKNIAI
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