Gene Haur_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0106 
Symbol 
ID5731999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp139805 
End bp140431 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content48% 
IMG OID641277228 
Productcytochrome c oxidase subunit III 
Protein accessionYP_001542886 
Protein GI159896639 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAGG CAGTCGTGCG CGATATCGAT AAAAATGATC CTGGGCGTGG CCTCGATTTA 
CGCAAACTGG GCATGTGGAC GTTCCTTGGC TCAGAAGTCT TTTTCTTCGG AGCTTTGGTG 
GTTACTCACC TCTCAATGCG CGGGGTTGTA GCACCATCAT CAAGCAAAGC CAATTATGAT 
GTTGCGGCAG TTCGTAATTT GTTTGGCGAT AATGTGCTGA CCTCGATTCT AGCCTTCATC 
TTGTTGACCA GTAGTTTGAC AATGGTGTTG GCACTGGATG GGGTTAAAAC CAACAACCAA 
AAGCGTTTCC GCTTCTGGTT GGGAGCAACC ATCGCCTGTG GTTTGGTCTT CTTGGGTGGT 
CAGGTTTACG AGTTCTATCA CATTGTCCAC GAAGGTGTGA CGATTAAAAA TATGATGTTT 
GGCTCGACTT TCTTCTTTGT AACCGGCTTC CACGGAACCC ACGTTGCAGT TGGGGTGGTT 
TGGCTCACAT CATTATTGGT TTCGGCAATT CGCCACCCTG AGCGCTACAA TGCTGGCAAT 
TATATGGCTG TCGAGCTAGG CGGCTTGTAT TGGCACTTTG TAGACTTAGT GTGGGTCTTG 
ATCTTTACGG TGATCTATCT GATCTAA
 
Protein sequence
MAQAVVRDID KNDPGRGLDL RKLGMWTFLG SEVFFFGALV VTHLSMRGVV APSSSKANYD 
VAAVRNLFGD NVLTSILAFI LLTSSLTMVL ALDGVKTNNQ KRFRFWLGAT IACGLVFLGG 
QVYEFYHIVH EGVTIKNMMF GSTFFFVTGF HGTHVAVGVV WLTSLLVSAI RHPERYNAGN 
YMAVELGGLY WHFVDLVWVL IFTVIYLI